Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia26374 Actinidia chinensis
Actinidia38726 Actinidia chinensis
Aqoxy7G03643 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.95Z9LX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z0P5BB Arachis hypogaea
ATR0800G160 Amborella trichopoda
Atru.chr7.1944 Acer truncatum
AUR62011171 Chenopodium quinoa
AUR62013313 Chenopodium quinoa
CAN.G672.10 Capsicum annuum
CANSAT11G1523 Cannabis sativa
Ca_06937_v3 Cicer arietinum L.
Cc06_g08130 Coffea canephora
CDE04G3776 Ceratophyllum demersum
Cfa003418 Carpinus fangiana
Ciclev10008365m.g Citrus clementina
CiPaw.03G247800 Carya illinoinensis
ClCG06G011450 Citrullus lanatus
ClCG11G003290 Citrullus lanatus
COL.COLO4_35144 Corchorus olitorius
Cpa.g.sc46.36 Carica papaya
CsaV3_1G026680 Cucumis sativus L.
CsaV3_2G003110 Cucumis sativus L.
CSS0028823 Camellia sinensis var. sinensis
CSS0034021 Camellia sinensis var. sinensis
DCAR_014899 Daucus carota
Dinv36484 Davidia involucrata
Dinv41480 Davidia involucrata
Duzib150G1050 Durio zibethinus
Duzib168G2044 Durio zibethinus
Duzib187G1694 Durio zibethinus
ECA236G2899 Erigeron canadensis
EL10Ac8g18712 Beta vulgaris
Eucgr.C01379 Eucalyptus grandis
FAN23G0717 Fragaria x ananassa
FAN26G2819 Fragaria x ananassa
FAN26G3135 Fragaria x ananassa
FAN28G1624 Fragaria x ananassa
FvH4_1g02650 Fragaria vesca
Glyma.13G159400 Glycine max
Glyma.17G112100 Glycine max
Gohir.A05G014600 Gossypium hirsutum
Gohir.A07G037600 Gossypium hirsutum
Gohir.D05G015700 Gossypium hirsutum
Gohir.D07G041700 Gossypium hirsutum
Gorai.001G044200 Gossypium raimondii
Gorai.009G015800 Gossypium raimondii
GSVIVG01015582001 Vitis vinifera
HanXRQChr05g0138491 Helianthus annuus
HanXRQChr06g0180491 Helianthus annuus
Haze_25515 Corylus avellana
Hma1.2p1_0497F.1_g166330 Hydrangea macrophylla
HPP92_017055 Vanilla planifolia
Hund09278 Selenicereus undatus
Lalb_Chr12g0198131 Lupinus albus
Lj4g0006369 Lotus japonicus
Lj7A428T31 Lonicera japonica
Lsat_1_v5_gn_8_62601 Lactuca sativa
Manes.06G048000 Manihot esculenta
Manes.14G116000 Manihot esculenta
MBI14_g15861_MAGBIO Magnolia biondii
MBI14_g42847_MAGBIO Magnolia biondii
MD15G1168500 Malus domestica
Medtr4g115120 Medicago truncatula
Medtr4g123480 Medicago truncatula
MELO3C004463.2 Cucumis melo
MELO3C010316.2 Cucumis melo
Migut.K00430 Erythranthe guttata
MSTRG.10666 Avicennia marina
Nitab4.5_0004146g0020 Nicotiana tabacum
Nitab4.5_0004513g0040 Nicotiana tabacum
Nn8g39523 Nelumbo nucifera
Oeu012629.1 Olea europaea
Os06g0168800 Oryza sativa ssp. japonica
Peaxi162Scf00088g01622 Petunia axillaris
PGR142G3709 Punica granatum
PGSC0003DMG400030894 Solanum tuberosum
Phvul.003G168000 Phaseolus vulgaris
Potri.006G066100 Populus trichocarpa
Potri.018G127300 Populus trichocarpa
Prupe.7G248000 Prunus persica
Psat4g037000 Pisum sativum
PSO017G4548 Papaver somniferum
PSO170G1105 Papaver somniferum
QL02p089737 Quercus lobata
RcHm_v2.0_Chr2g0087681 Rosa chinensis
Rhsim03G0250900 Rhododendron simsii
Sabra06G0048800 Salix brachista
Sabra18G0108000 Salix brachista
Sc18g0000400 Simmondsia chinensis
Sed0013302 Sechium edule
Sed0013433 Sechium edule
Sed0016944 Sechium edule
SGA_v2.0_scaffold109G31051 Striga asiatica
Solyc07g007980.3 Solanum lycopersicum
Sopen07g003860 Solanum pennellii
TAR625G1050 Trochodendron aralioides
TAR636G3434 Trochodendron aralioides
THA.LOC104815268 Tarenaya hassleriana
Thecc.09G131300 Theobroma cacao
TPR.G26473 Trifolium pratense
TWI34G0729 Tripterygium wilfordii
TWI63G1045 Tripterygium wilfordii
vmacro06152 Vaccinium macrocarpon
VMungo1215G2588 Vigna mungo
Zm00001eb375480 Zea mays

User provided reference genes

Program Settings