Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p26200 Brassica napus
Aa31LG9G9760 Aethionema arabicum
Actinidia00789 Actinidia chinensis
Ah.04g150680 Amaranthus hybridus
AL6G48080 Arabidopsis lyrata
Aqoxy5G00426 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea
AT4G04614 Arabidopsis thaliana
ATR0665G488 Amborella trichopoda
Atru.chr5.1489 Acer truncatum
AUR62030273 Chenopodium quinoa
BcaB01g01820 Brassica carinata
BcaC04g21312 Brassica carinata
BolC9t56165H Brassica oleracea
BraA09t38188Z Brassica rapa
C09p33290 Brassica napus
CAN.G1105.2 Capsicum annuum
CANSAT78G1636 Cannabis sativa
CARHR252930 Cardamine hirsuta
Carub.0006s3245 Capsella rubella
Ca_09739_v3 Cicer arietinum L.
Cc01_g19160 Coffea canephora
CDE06G2441 Ceratophyllum demersum
Cfa006177 Carpinus fangiana
Ciclev10022575m.g Citrus clementina
CiPaw.07G088700 Carya illinoinensis
ClCG09G007290 Citrullus lanatus
COL.COLO4_25451 Corchorus olitorius
Cpa.g.sc95.34 Carica papaya
Cre17.g717700 Chlamydomonas reinhardtii
CsaV3_7G027780 Cucumis sativus L.
CSS0002766 Camellia sinensis var. sinensis
CSS0036584 Camellia sinensis var. sinensis
DCAR_018437 Daucus carota
Duzib168G0678 Durio zibethinus
ECA247G1531 Erigeron canadensis
EL10Ac3g07280 Beta vulgaris
Eucgr.K03341 Eucalyptus grandis
FAN15G1284 Fragaria x ananassa
FAN20G3170 Fragaria x ananassa
FAN24G1308 Fragaria x ananassa
FAN27G1502 Fragaria x ananassa
FvH4_2g23140 Fragaria vesca
Glyma.02G145500 Glycine max
Glyma.10G028600 Glycine max
Gohir.A08G081100 Gossypium hirsutum
Gohir.D08G093000 Gossypium hirsutum
Gorai.004G098600 Gossypium raimondii
GSVIVG01001191001 Vitis vinifera
HanXRQChr10g0282251 Helianthus annuus
Haze_04670 Corylus avellana
HPP92_020354 Vanilla planifolia
Hund09518 Selenicereus undatus
Lalb_Chr06g0162851 Lupinus albus
Lj5g0008996 Lotus japonicus
Lsat_1_v5_gn_9_6101 Lactuca sativa
Manes.05G078600 Manihot esculenta
Mapoly0035s0101 Marchantia polymorpha
MBI11_g22999_MAGBIO Magnolia biondii
MD03G1260500 Malus domestica
MD11G1280800 Malus domestica
Medtr1g071630 Medicago truncatula
MELO3C015793.2 Cucumis melo
Migut.D00331 Erythranthe guttata
MSTRG.21545 Avicennia marina
Nitab4.5_0000252g0090 Nicotiana tabacum
Nitab4.5_0009452g0010 Nicotiana tabacum
Nn6g34127 Nelumbo nucifera
Oeu059791.1 Olea europaea
Os06g0630300 Oryza sativa ssp. japonica
Peaxi162Scf00230g01010 Petunia axillaris
PGR044G1958 Punica granatum
PGSC0003DMG400019353 Solanum tuberosum
Phvul.007G173800 Phaseolus vulgaris
Potri.005G213000 Populus trichocarpa
Pp3c25_4880 Physcomitrium patens
Prupe.8G236700 Prunus persica
Psat6g059880 Pisum sativum
PSO210G0643 Papaver somniferum
PSO832G2845 Papaver somniferum
QL12p020752 Quercus lobata
RcHm_v2.0_Chr6g0290391 Rosa chinensis
Rhsim13G0027600 Rhododendron simsii
Sabra05G0162700 Salix brachista
SalBow4G1029 Salvia bowleyana
Sc05g0001200 Simmondsia chinensis
Sed0008482 Sechium edule
SEGI_27286 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00514 Striga asiatica
SGA_v2.0_scaffold244G44361 Striga asiatica
SMO351G0424 Selaginella moellendorffii
Solyc09g065510.3 Solanum lycopersicum
Sopen09g027270 Solanum pennellii
Sopen12g025260 Solanum pennellii
Sp6g04310 Schrenkiella parvula
TAR636G2514 Trochodendron aralioides
THA.LOC104813154 Tarenaya hassleriana
Thecc.09G179900 Theobroma cacao
Thhalv10029017m.g Eutrema salsugineum
TPR.G25681 Trifolium pratense
TWI18G1441 Tripterygium wilfordii
unitig_0.g1138 Utricularia gibba
vmacro02599 Vaccinium macrocarpon
VMungo0720G1463 Vigna mungo

User provided reference genes

Program Settings