Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p05110 Brassica napus
Aa31LG1G7460 Aethionema arabicum
Actinidia33002 Actinidia chinensis
Ah.04g150860 Amaranthus hybridus
AL1G16450 Arabidopsis lyrata
Aqoxy1G01888 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3HIG3T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AETP6W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PK7WRQ Arachis hypogaea
AT1G06440 Arabidopsis thaliana
ATR0618G155 Amborella trichopoda
Atru.chr6.2753 Acer truncatum
AUR62004731 Chenopodium quinoa
AUR62037529 Chenopodium quinoa
AUR62039037 Chenopodium quinoa
BolC5t29242H Brassica oleracea
BraA10t42776Z Brassica rapa
C05p04700 Brassica napus
CAN.G809.81 Capsicum annuum
CANSAT01G2405 Cannabis sativa
CARHR006050 Cardamine hirsuta
Carub.0001s0580 Capsella rubella
Ca_15103_v3 Cicer arietinum L.
Cc07_g12550 Coffea canephora
CDE07G1348 Ceratophyllum demersum
Cfa006889 Carpinus fangiana
Cfa010237 Carpinus fangiana
Ciclev10018363m.g Citrus clementina
CiPaw.06G064100 Carya illinoinensis
ClCG03G014220 Citrullus lanatus
COL.COLO4_22317 Corchorus olitorius
Cpa.g.sc199.15 Carica papaya
CsaV3_1G042010 Cucumis sativus L.
CSS0040955 Camellia sinensis var. sinensis
DCAR_003386 Daucus carota
Dinv42707 Davidia involucrata
Duzib093G1032 Durio zibethinus
ECA236G3979 Erigeron canadensis
EL10Ac3g07268 Beta vulgaris
Eucgr.A02603 Eucalyptus grandis
Eucgr.I00443 Eucalyptus grandis
FAN16G0729 Fragaria x ananassa
FvH4_3g11420 Fragaria vesca
Glyma.11G203100 Glycine max
Gohir.A04G067300 Gossypium hirsutum
Gohir.D04G106000 Gossypium hirsutum
Gorai.007G131600 Gossypium raimondii
Gorai.009G409900 Gossypium raimondii
GSVIVG01020990001 Vitis vinifera
GSVIVG01033205001 Vitis vinifera
HanXRQChr05g0144031 Helianthus annuus
Haze_03863 Corylus avellana
Hma1.2p1_0085F.1_g043930 Hydrangea macrophylla
Hma1.2p1_0085F.1_g043940 Hydrangea macrophylla
Hma1.2p1_0085F.1_g043990 Hydrangea macrophylla
Hma1.2p1_0316F.1_g122790 Hydrangea macrophylla
HPP92_012880 Vanilla planifolia
Hund28145 Selenicereus undatus
Hund28148 Selenicereus undatus
Lalb_Chr15g0085471 Lupinus albus
Lj2P390T23 Lonicera japonica
Lj6g0000577 Lotus japonicus
Lsat_1_v5_gn_8_63660 Lactuca sativa
Manes.18G104900 Manihot esculenta
MBI06_g27511_MAGBIO Magnolia biondii
Medtr3g063230 Medicago truncatula
MELO3C015617.2 Cucumis melo
Migut.I00362 Erythranthe guttata
MSTRG.15616 Avicennia marina
Nitab4.5_0000108g0040 Nicotiana tabacum
Nitab4.5_0006392g0070 Nicotiana tabacum
Nn4g25087 Nelumbo nucifera
Oeu002676.1 Olea europaea
Os10g0510300 Oryza sativa ssp. japonica
Peaxi162Scf00344g01711 Petunia axillaris
PGR004G2170 Punica granatum
PGSC0003DMG401017729 Solanum tuberosum
Phvul.006G083700 Phaseolus vulgaris
Potri.002G244900 Populus trichocarpa
Potri.002G245100 Populus trichocarpa
Prupe.4G102100 Prunus persica
Psat5g144760 Pisum sativum
QL03p016896 Quercus lobata
Rhsim10G0187400 Rhododendron simsii
Sabra02G0186500 Salix brachista
SalBow5G0247 Salvia bowleyana
Sc07g0001480 Simmondsia chinensis
Sed0009381 Sechium edule
Sed0011629 Sechium edule
Sed0011937 Sechium edule
SEGI_00364 Sequoiadendron giganteum
SGA_v2.0_scaffold199G41255 Striga asiatica
SHI31601 Sapria himalayana
Solyc02g081530.1 Solanum lycopersicum
Sopen02g026160 Solanum pennellii
Sp1g05200 Schrenkiella parvula
TAR381G0501 Trochodendron aralioides
TAR381G1111 Trochodendron aralioides
TAR629G0879 Trochodendron aralioides
THA.LOC104815842 Tarenaya hassleriana
Thecc.02G213100 Theobroma cacao
Thhalv10007863m.g Eutrema salsugineum
TPR.G37321 Trifolium pratense
unitig_748.g7014 Utricularia gibba
vmacro20435 Vaccinium macrocarpon
VMungo0540G0435 Vigna mungo
Zm00001eb043780 Zea mays
Zm00001eb264340 Zea mays

User provided reference genes

Program Settings