Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p05700 Brassica napus
A07p05850 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis
Actinidia27999 Actinidia chinensis
AL3G46300 Arabidopsis lyrata
Aqoxy5G00361 Aquilegia oxysepala
AT2G14660 Arabidopsis thaliana
ATR0739G196 Amborella trichopoda
Atru.chr5.2303 Acer truncatum
AUR62004510 Chenopodium quinoa
AUR62023444 Chenopodium quinoa
BcaB03g16261 Brassica carinata
BcaB05g22586 Brassica carinata
BcaC06g36001 Brassica carinata
BolC7t41323H Brassica oleracea
BraA07t28366Z Brassica rapa
BraA07t28378Z Brassica rapa
C07p09120 Brassica napus
CAN.G1427.5 Capsicum annuum
CANSAT25G2862 Cannabis sativa
CARHR286340 Cardamine hirsuta
Carub.0003s2869 Capsella rubella
CBR_g38178 Chara braunii
Cc00_g18000 Coffea canephora
CDE07G0917 Ceratophyllum demersum
Cfa004703 Carpinus fangiana
Cfa026913 Carpinus fangiana
CiPaw.06G164200 Carya illinoinensis
ClCG10G010070 Citrullus lanatus
COL.COLO4_02194 Corchorus olitorius
COL.COLO4_32488 Corchorus olitorius
Cpa.g.sc91.59 Carica papaya
Cre12.g497650 Chlamydomonas reinhardtii
CsaV3_4G000110 Cucumis sativus L.
CSS0003584 Camellia sinensis var. sinensis
Duzib132G0829 Durio zibethinus
Duzib248G0869 Durio zibethinus
EL10Ac1g00245 Beta vulgaris
FAN15G0831 Fragaria x ananassa
FAN24G0656 Fragaria x ananassa
FAN27G2772 Fragaria x ananassa
FvH4_2g03350 Fragaria vesca
FvH4_2g03390 Fragaria vesca
Glyma.01G241600 Glycine max
Gohir.A13G047700 Gossypium hirsutum
Gohir.D13G046000 Gossypium hirsutum
Gorai.013G051500 Gossypium raimondii
HanXRQChr10g0305111 Helianthus annuus
HPP92_015706 Vanilla planifolia
HPP92_026656 Vanilla planifolia
Lalb_Chr20g0110071 Lupinus albus
Lj1g0027535 Lotus japonicus
Lj9P337T35 Lonicera japonica
Lsat_1_v5_gn_5_117140 Lactuca sativa
Manes.10G086600 Manihot esculenta
Mapoly0117s0004 Marchantia polymorpha
MBI16_g27033_MAGBIO Magnolia biondii
MBI16_g39097_MAGBIO Magnolia biondii
MCO07G364 Micromonas commoda
MD05G1105400 Malus domestica
MD10G1109900 Malus domestica
Medtr5g005350 Medicago truncatula
Medtr8g027785 Medicago truncatula
MELO3C018021.2 Cucumis melo
Migut.B00461 Erythranthe guttata
MSTRG.20237 Avicennia marina
Nitab4.5_0001458g0020 Nicotiana tabacum
Nitab4.5_0011705g0020 Nicotiana tabacum
Nn5g30651 Nelumbo nucifera
Oeu034165.1 Olea europaea
Oeu037289.1 Olea europaea
Os03g0676100 Oryza sativa ssp. japonica
Os08g0485300 Oryza sativa ssp. japonica
Peaxi162Scf00003g02812 Petunia axillaris
PGR142G3835 Punica granatum
PGSC0003DMG400012841 Solanum tuberosum
Phvul.002G050900 Phaseolus vulgaris
Potri.009G085700 Populus trichocarpa
Pp3c10_11040 Physcomitrium patens
Prupe.8G149700 Prunus persica
Prupe.8G150000 Prunus persica
Psat4g228720 Pisum sativum
PSO541G2903 Papaver somniferum
PSO541G3645 Papaver somniferum
PSO675G4557 Papaver somniferum
QL11p029372 Quercus lobata
RcHm_v2.0_Chr6g0248511 Rosa chinensis
Rhsim05G0092800 Rhododendron simsii
Sabra09G0065800 Salix brachista
Sc01g0002530 Simmondsia chinensis
Sed0014293 Sechium edule
SEGI_07672 Sequoiadendron giganteum
SGA_v2.0_scaffold32G12987 Striga asiatica
SHI05019 Sapria himalayana
Solyc10g048190.1 Solanum lycopersicum
Sopen10g020220 Solanum pennellii
Sp3g27770 Schrenkiella parvula
TAR625G0338 Trochodendron aralioides
THA.LOC104804397 Tarenaya hassleriana
Thecc.02G119600 Theobroma cacao
Thhalv10023010m.g Eutrema salsugineum
TPR.G8318 Trifolium pratense
TWI23G0417 Tripterygium wilfordii
TWI59G0351 Tripterygium wilfordii
unitig_0.g633 Utricularia gibba
vmacro22256 Vaccinium macrocarpon
VMungo1215G1258 Vigna mungo
Zm00001eb217400 Zea mays

User provided reference genes

Program Settings