Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p36070 Brassica napus
Aa31LG1G7260 Aethionema arabicum
Actinidia30444 Actinidia chinensis
Ah.01g003840 Amaranthus hybridus
AL1G16230 Arabidopsis lyrata
Aqoxy1G03215 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Y5LIHD Arachis hypogaea
AT1G06240 Arabidopsis thaliana
ATR0602G260 Amborella trichopoda
Atru.chr6.2820 Acer truncatum
AUR62042313 Chenopodium quinoa
BcaB03g13427 Brassica carinata
BolC8t47036H Brassica oleracea
BraA08t35513Z Brassica rapa
C08p02440 Brassica napus
CAN.G782.8 Capsicum annuum
CANSAT64G0866 Cannabis sativa
CARHR005780 Cardamine hirsuta
Carub.0001s0560 Capsella rubella
Ca_01466_v3 Cicer arietinum L.
Cc05_g08090 Coffea canephora
CDE02G1032 Ceratophyllum demersum
Cfa014712 Carpinus fangiana
Ciclev10015689m.g Citrus clementina
CiPaw.03G185700 Carya illinoinensis
ClCG09G011360 Citrullus lanatus
Cpa.g.sc209.23 Carica papaya
Cre14.g620951 Chlamydomonas reinhardtii
CsaV3_6G037600 Cucumis sativus L.
CSS0016016 Camellia sinensis var. sinensis
CSS0031949 Camellia sinensis var. sinensis
CSS0041062 Camellia sinensis var. sinensis
CSS0047420 Camellia sinensis var. sinensis
Dinv03920 Davidia involucrata
Duzib264G1175 Durio zibethinus
EL10Ac9g20875 Beta vulgaris
EL10Ac9g20877 Beta vulgaris
Eucgr.K01098 Eucalyptus grandis
FAN14G3381 Fragaria x ananassa
FvH4_6g27080 Fragaria vesca
Glyma.12G209200 Glycine max
Glyma.13G292102 Glycine max
Gohir.A09G002200 Gossypium hirsutum
Gohir.D09G001900 Gossypium hirsutum
Gorai.006G002000 Gossypium raimondii
GSVIVG01020671001 Vitis vinifera
HanXRQChr13g0392321 Helianthus annuus
Haze_13342 Corylus avellana
Hma1.2p1_0178F.1_g079040 Hydrangea macrophylla
Hma1.2p1_3865F.1_g337840 Hydrangea macrophylla
HPP92_004047 Vanilla planifolia
HPP92_004056 Vanilla planifolia
Hund07837 Selenicereus undatus
Lalb_Chr14g0367371 Lupinus albus
Lj1A689G21 Lonicera japonica
Lj3g0015265 Lotus japonicus
Lsat_1_v5_gn_8_139680 Lactuca sativa
Manes.13G138800 Manihot esculenta
Mapoly0003s0287 Marchantia polymorpha
MBI07_g17046_MAGBIO Magnolia biondii
MCO16G265 Micromonas commoda
MD09G1240300 Malus domestica
Medtr2g091140 Medicago truncatula
MELO3C014352.2 Cucumis melo
Migut.H02153 Erythranthe guttata
MSTRG.20320 Avicennia marina
Nitab4.5_0003291g0030 Nicotiana tabacum
Nitab4.5_0007774g0060 Nicotiana tabacum
Nn1g09051 Nelumbo nucifera
Oeu038788.1 Olea europaea
Os01g0214400 Oryza sativa ssp. japonica
Peaxi162Scf00241g00919 Petunia axillaris
PGR142G3516 Punica granatum
PGSC0003DMG400010559 Solanum tuberosum
Phvul.005G096600 Phaseolus vulgaris
Potri.019G090600 Populus trichocarpa
Pp3c10_18540 Physcomitrium patens
PRCOL_00001242 Prasinoderma coloniale
Prupe.3G124300 Prunus persica
Psat5g275520 Pisum sativum
PSO675G8657 Papaver somniferum
QL08p041327 Quercus lobata
RcHm_v2.0_Chr2g0129041 Rosa chinensis
Rhsim04G0073500 Rhododendron simsii
Sabra19G0100800 Salix brachista
Sabra19G0104200 Salix brachista
SalBow7G3091 Salvia bowleyana
Sc21g0003800 Simmondsia chinensis
Sc21g0003810 Simmondsia chinensis
Sed0016786 Sechium edule
SGA_v2.0_scaffold9G04917 Striga asiatica
SMO180G0029 Selaginella moellendorffii
SMO340G0318 Selaginella moellendorffii
Solyc10g008060.4 Solanum lycopersicum
Solyc10g049900.1 Solanum lycopersicum
Sopen10g003930 Solanum pennellii
Sp1g05050 Schrenkiella parvula
TAR627G0601 Trochodendron aralioides
THA.LOC104800864 Tarenaya hassleriana
Thecc.01G243100 Theobroma cacao
Thhalv10007851m.g Eutrema salsugineum
TPR.G11579 Trifolium pratense
TWI14G0656 Tripterygium wilfordii
unitig_744.g24492 Utricularia gibba
vmacro09230 Vaccinium macrocarpon
VMungo1080G0348 Vigna mungo
VMungo1080G0449 Vigna mungo
Zm00001eb119970 Zea mays
Zm00001eb199640 Zea mays

User provided reference genes

Program Settings