Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p22160 Brassica napus
Aa31LG4G13700 Aethionema arabicum
Actinidia24259 Actinidia chinensis
AL5G22190 Arabidopsis lyrata
Aqoxy1G00635 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1RS4AR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62TI7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7IM9YU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PFP40K Arachis hypogaea
AT3G44160 Arabidopsis thaliana
AT3G48620 Arabidopsis thaliana
Atru.chr3.3097 Acer truncatum
AUR62001564 Chenopodium quinoa
AUR62020219 Chenopodium quinoa
BcaB01g01195 Brassica carinata
BcaC01g02074 Brassica carinata
BolC3t19140H Brassica oleracea
BraA06t25306Z Brassica rapa
C03p68820 Brassica napus
CAN.G742.36 Capsicum annuum
CANSAT54G1236 Cannabis sativa
CARHR152940 Cardamine hirsuta
Carub.0005s0988 Capsella rubella
Ca_01628_v3 Cicer arietinum L.
Cc01_g07780 Coffea canephora
CDE06G2648 Ceratophyllum demersum
Cfa010184 Carpinus fangiana
Ciclev10028708m.g Citrus clementina
CiPaw.13G128500 Carya illinoinensis
COL.COLO4_25403 Corchorus olitorius
Cpa.g.sc103.20 Carica papaya
CSS0043527 Camellia sinensis var. sinensis
DCAR_012247 Daucus carota
Dinv33545 Davidia involucrata
Duzib168G0193 Durio zibethinus
Duzib170G0683 Durio zibethinus
ECA238G0364 Erigeron canadensis
EL10Ac7g16284 Beta vulgaris
Eucgr.J00580 Eucalyptus grandis
FAN11G0460 Fragaria x ananassa
FAN21G0044 Fragaria x ananassa
FAN25G3029 Fragaria x ananassa
FvH4_3g26270 Fragaria vesca
Glyma.10G034900 Glycine max
Glyma.12G189700 Glycine max
Glyma.13G312000 Glycine max
Gohir.A09G100400 Gossypium hirsutum
Gohir.D09G099800 Gossypium hirsutum
Gorai.006G116800 Gossypium raimondii
GSVIVG01037593001 Vitis vinifera
HanXRQChr14g0431721 Helianthus annuus
Haze_23574 Corylus avellana
HPP92_017671 Vanilla planifolia
HPP92_017672 Vanilla planifolia
Hund20954 Selenicereus undatus
Lalb_Chr06g0162501 Lupinus albus
Lalb_Chr24g0393331 Lupinus albus
Lj2A953T36 Lonicera japonica
Lj3g0028100 Lotus japonicus
Lj5g0017173 Lotus japonicus
Lsat_1_v5_gn_2_35420 Lactuca sativa
Manes.04G062700 Manihot esculenta
MBI11_g15177_MAGBIO Magnolia biondii
MD03G1159000 Malus domestica
MD11G1174200 Malus domestica
Medtr1g070230 Medicago truncatula
Medtr2g087590 Medicago truncatula
Migut.N02441 Erythranthe guttata
MSTRG.17676 Avicennia marina
Nitab4.5_0000015g0010 Nicotiana tabacum
Nitab4.5_0004762g0040 Nicotiana tabacum
Nn2g14351 Nelumbo nucifera
Nn6g34633 Nelumbo nucifera
Oeu048828.1 Olea europaea
Os05g0510200 Oryza sativa ssp. japonica
Peaxi162Scf00429g00124 Petunia axillaris
PGR119G1910 Punica granatum
PGSC0003DMG400002985 Solanum tuberosum
Phvul.005G118400 Phaseolus vulgaris
Phvul.007G195200 Phaseolus vulgaris
Potri.001G215500 Populus trichocarpa
Potri.009G017100 Populus trichocarpa
Prupe.6G146000 Prunus persica
Psat5g262320 Pisum sativum
PSO675G6923 Papaver somniferum
PSO675G8897 Papaver somniferum
QL01p019379 Quercus lobata
RcHm_v2.0_Chr5g0048701 Rosa chinensis
Rhsim13G0197200 Rhododendron simsii
Sabra16G0127900 Salix brachista
SalBow3G2470 Salvia bowleyana
Sc12g0000330 Simmondsia chinensis
SEGI_21098 Sequoiadendron giganteum
SGA_v2.0_scaffold268G46207 Striga asiatica
Solyc11g071890.3 Solanum lycopersicum
Sopen11g029560 Solanum pennellii
Sp5g17200 Schrenkiella parvula
TAR369G1112 Trochodendron aralioides
TAR623G1346 Trochodendron aralioides
THA.LOC104815080 Tarenaya hassleriana
Thecc.09G270800 Theobroma cacao
Thhalv10010440m.g Eutrema salsugineum
TPR.G27238 Trifolium pratense
TPR.G4239 Trifolium pratense
unitig_22.g6163 Utricularia gibba
vmacro03950 Vaccinium macrocarpon
VMungo0720G1969 Vigna mungo
VMungo1080G0110 Vigna mungo
Zm00001eb292440 Zea mays

User provided reference genes

Program Settings