Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p08290 Brassica napus
Aa31LG3G5880 Aethionema arabicum
Actinidia36802 Actinidia chinensis
Ah.01g015920 Amaranthus hybridus
AL8G24600 Arabidopsis lyrata
Aqoxy4G02129 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8S8XL0 Arachis hypogaea
AT5G50390 Arabidopsis thaliana
ATR1088G021 Amborella trichopoda
Atru.chr9.1121 Acer truncatum
AUR62023099 Chenopodium quinoa
BcaB08g35453 Brassica carinata
BcaC04g20798 Brassica carinata
BolC9t56786H Brassica oleracea
BraSC35t45969Z Brassica rapa
C09p39070 Brassica napus
CAN.G65.103 Capsicum annuum
CANSAT64G2030 Cannabis sativa
CARHR258010 Cardamine hirsuta
Carub.0008s1050 Capsella rubella
Ca_14234_v3 Cicer arietinum L.
Ca_30545_v3 Cicer arietinum L.
Cc03_g13640 Coffea canephora
Cfa007569 Carpinus fangiana
Ciclev10019093m.g Citrus clementina
CiPaw.03G025600 Carya illinoinensis
ClCG09G018170 Citrullus lanatus
COL.COLO4_28102 Corchorus olitorius
Cpa.g.sc2981.1 Carica papaya
CsaV3_5G038080 Cucumis sativus L.
CSS0043019 Camellia sinensis var. sinensis
DCAR_007489 Daucus carota
Dinv23141 Davidia involucrata
Duzib205G1369 Durio zibethinus
ECA232G3824 Erigeron canadensis
EL10Ac9g21146 Beta vulgaris
Eucgr.K02731 Eucalyptus grandis
FAN02G1289 Fragaria x ananassa
FAN05G2744 Fragaria x ananassa
FAN09G1083 Fragaria x ananassa
FAN14G0252 Fragaria x ananassa
FvH4_6g48290 Fragaria vesca
Glyma.08G160200 Glycine max
Glyma.09G237200 Glycine max
Glyma.18G260266 Glycine max
Gohir.A12G189300 Gossypium hirsutum
Gohir.D12G191600 Gossypium hirsutum
Gorai.008G205900 Gossypium raimondii
GSVIVG01008537001 Vitis vinifera
HanXRQChr09g0273131 Helianthus annuus
Haze_14517 Corylus avellana
Hma1.2p1_0014F.1_g009510 Hydrangea macrophylla
Hma1.2p1_0014F.1_g009520 Hydrangea macrophylla
HPP92_011129 Vanilla planifolia
Lalb_Chr10g0093411 Lupinus albus
Lj1g0027844 Lotus japonicus
Lj5C98T12 Lonicera japonica
LjContig00564g0017030 Lotus japonicus
Lsat_1_v5_gn_4_80100 Lactuca sativa
Manes.06G119200 Manihot esculenta
MBI02_g29718_MAGBIO Magnolia biondii
MBI19_g16226_MAGBIO Magnolia biondii
MD00G1131200 Malus domestica
MD09G1052300 Malus domestica
Medtr3g012530 Medicago truncatula
Migut.D01261 Erythranthe guttata
MSTRG.9323 Avicennia marina
Nitab4.5_0000343g0340 Nicotiana tabacum
Nitab4.5_0004815g0020 Nicotiana tabacum
Nn1g03719 Nelumbo nucifera
Oeu045457.1 Olea europaea
Os08g0138600 Oryza sativa ssp. japonica
Peaxi162Scf00880g00022 Petunia axillaris
PGR044G0457 Punica granatum
PGSC0003DMG400016037 Solanum tuberosum
Phvul.001G165000 Phaseolus vulgaris
Potri.015G095100 Populus trichocarpa
Prupe.3G266400 Prunus persica
Psat3g045360 Pisum sativum
PSO541G3316 Papaver somniferum
PSO675G9159 Papaver somniferum
QL02p082450 Quercus lobata
QL07p010674 Quercus lobata
QL07p011232 Quercus lobata
RcHm_v2.0_Chr2g0167801 Rosa chinensis
RcHm_v2.0_Chr2g0168271 Rosa chinensis
RcHm_v2.0_Chr6g0267531 Rosa chinensis
Rhsim10G0051300 Rhododendron simsii
Rhsim10G0051400 Rhododendron simsii
Sabra15G0116300 Salix brachista
SalBow1G1648 Salvia bowleyana
SalBow1G3167 Salvia bowleyana
Sc10g0010450 Simmondsia chinensis
Sed0027655 Sechium edule
SEGI_32606 Sequoiadendron giganteum
SEGI_34203 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02869 Striga asiatica
Solyc07g042130.4 Solanum lycopersicum
Sopen07g021720 Solanum pennellii
Sp6g12540 Schrenkiella parvula
SpUn0015_0100 Schrenkiella parvula
TAR627G0386 Trochodendron aralioides
TAR627G0594 Trochodendron aralioides
THA.LOC104803147 Tarenaya hassleriana
THA.LOC104818094 Tarenaya hassleriana
Thecc.03G128500 Theobroma cacao
Thhalv10012807m.g Eutrema salsugineum
TWI39G0389 Tripterygium wilfordii
unitig_899.g14760 Utricularia gibba
VMungo1383G0276 Vigna mungo

User provided reference genes

Program Settings