Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p51090 Brassica napus
Aa31LG10G13110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis
Actinidia17284 Actinidia chinensis
Ah.13g075580 Amaranthus hybridus
AL5G40300 Arabidopsis lyrata
Aqoxy279s002 Aquilegia oxysepala
Aqoxy2G00051 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea
AT3G58530 Arabidopsis thaliana
ATR0001G043 Amborella trichopoda
Atru.BG.213.p Acer truncatum
Atru.chr8.1185 Acer truncatum
AUR62015309 Chenopodium quinoa
AUR62032747 Chenopodium quinoa
BcaC02g10014 Brassica carinata
BcaC07g40246 Brassica carinata
C04p33960 Brassica napus
C08p33910 Brassica napus
CAN.G111.5 Capsicum annuum
CANSAT64G0938 Cannabis sativa
CARHR168930 Cardamine hirsuta
Carub.0005s2528 Capsella rubella
Ca_03573_v3 Cicer arietinum L.
Cc06_g15630 Coffea canephora
CDE04G3485 Ceratophyllum demersum
Cfa020128 Carpinus fangiana
Ciclev10012430m.g Citrus clementina
CiPaw.09G027300 Carya illinoinensis
COL.COLO4_29390 Corchorus olitorius
Cpa.g.sc85.35 Carica papaya
CSS0035640 Camellia sinensis var. sinensis
CSS0044198 Camellia sinensis var. sinensis
DCAR_019856 Daucus carota
Dinv16365 Davidia involucrata
Duzib106G0399 Durio zibethinus
ECA247G1245 Erigeron canadensis
EL10Ac3g06857 Beta vulgaris
Eucgr.K01865 Eucalyptus grandis
FAN02G0922 Fragaria x ananassa
FAN05G5781 Fragaria x ananassa
FAN09G2372 Fragaria x ananassa
FAN14G2546 Fragaria x ananassa
FvH4_6g21620 Fragaria vesca
Glyma.09G105500 Glycine max
Gohir.A04G053500 Gossypium hirsutum
Gohir.D04G094700 Gossypium hirsutum
Gorai.009G392400 Gossypium raimondii
GSVIVG01033441001 Vitis vinifera
HanXRQChr05g0140621 Helianthus annuus
HanXRQChr10g0300591 Helianthus annuus
HanXRQChr10g0316231 Helianthus annuus
Haze_20048 Corylus avellana
Haze_20055 Corylus avellana
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla
HPP92_010126 Vanilla planifolia
Hund24823 Selenicereus undatus
Lalb_Chr02g0153821 Lupinus albus
Lj5g0009846 Lotus japonicus
Lju124C23T17 Lonicera japonica
Lsat_1_v5_gn_9_26900 Lactuca sativa
Manes.09G039600 Manihot esculenta
Mapoly0209s0007 Marchantia polymorpha
MBI01_g24087_MAGBIO Magnolia biondii
MBI01_g44281_MAGBIO Magnolia biondii
MD12G1053200 Malus domestica
MD14G1051600 Malus domestica
Medtr1g054625 Medicago truncatula
Migut.K00028 Erythranthe guttata
Nitab4.5_0000009g0020 Nicotiana tabacum
Nitab4.5_0008255g0020 Nicotiana tabacum
Nn2g15783 Nelumbo nucifera
Os02g0281150 Oryza sativa ssp. japonica
Peaxi162Scf00258g00925 Petunia axillaris
PGR142G3952 Punica granatum
PGSC0003DMG400029168 Solanum tuberosum
Phvul.007G261900 Phaseolus vulgaris
Potri.006G195800 Populus trichocarpa
Pp3c23_2930 Physcomitrium patens
PRCOL_00005880 Prasinoderma coloniale
Prupe.7G084400 Prunus persica
Psat6g088000 Pisum sativum
PSO541G4948 Papaver somniferum
PSO675G7508 Papaver somniferum
QL07p025011 Quercus lobata
RcHm_v2.0_Chr3g0478871 Rosa chinensis
Rhsim04G0094400 Rhododendron simsii
Sabra06G0150500 Salix brachista
SalBow1G6257 Salvia bowleyana
Sc13g0002490 Simmondsia chinensis
SEGI_09769 Sequoiadendron giganteum
SGA_v2.0_scaffold274G46490 Striga asiatica
SMO118G0524 Selaginella moellendorffii
Solyc06g005380.3 Solanum lycopersicum
Sopen06g001340 Solanum pennellii
Sp5g04340 Schrenkiella parvula
TAR633G0683 Trochodendron aralioides
TAR633G1141 Trochodendron aralioides
THA.LOC104802720 Tarenaya hassleriana
Thecc.05G178200 Theobroma cacao
Thhalv10006065m.g Eutrema salsugineum
TPR.G19346 Trifolium pratense
unitig_736.g22301 Utricularia gibba
unitig_736.g22302 Utricularia gibba
vmacro22113 Vaccinium macrocarpon
VMungo0720G0788 Vigna mungo
Zm00001eb237210 Zea mays

User provided reference genes

Program Settings