Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p10340 Brassica napus
A03p51260 Brassica napus
Aa31LG6G1110 Aethionema arabicum
Actinidia13672 Actinidia chinensis
Actinidia33661 Actinidia chinensis
Ah.13g071740 Amaranthus hybridus
Ah.14g086320 Amaranthus hybridus
AL7G35950 Arabidopsis lyrata
Aqoxy4G00077 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KYL6KL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WWKL6Q Arachis hypogaea
AT4G18400 Arabidopsis thaliana
ATR1098G109 Amborella trichopoda
Atru.chr10.1132 Acer truncatum
BcaC06g30589 Brassica carinata
BcaC09g51519 Brassica carinata
BcaNung00005 Brassica carinata
BolC1t01205H Brassica oleracea
BraA01t00981Z Brassica rapa
BraA03t14208Z Brassica rapa
C01p12290 Brassica napus
CANSAT35G0370 Cannabis sativa
CARHR225220 Cardamine hirsuta
Carub.0007s2286 Capsella rubella
Cc00_g05770 Coffea canephora
CDE05G0627 Ceratophyllum demersum
CDE11G0374 Ceratophyllum demersum
Cfa000915 Carpinus fangiana
Ciclev10017932m.g Citrus clementina
CiPaw.09G121000 Carya illinoinensis
CiPaw.10G089700 Carya illinoinensis
ClCG01G024800 Citrullus lanatus
COL.COLO4_31031 Corchorus olitorius
Cpa.g.sc17.33 Carica papaya
CsaV3_6G051920 Cucumis sativus L.
CSS0006510 Camellia sinensis var. sinensis
DCAR_027898 Daucus carota
Dinv21533 Davidia involucrata
Dinv32223 Davidia involucrata
Duzib160G0207 Durio zibethinus
Duzib235G1408 Durio zibethinus
ECA234G3634 Erigeron canadensis
EL10Ac8g19636 Beta vulgaris
FAN11G0307 Fragaria x ananassa
FAN12G1070 Fragaria x ananassa
FAN14G0775 Fragaria x ananassa
FAN14G2280 Fragaria x ananassa
FAN16G3072 Fragaria x ananassa
FAN21G4020 Fragaria x ananassa
FAN25G1793 Fragaria x ananassa
FvH4_3g05190 Fragaria vesca
FvH4_3g19851 Fragaria vesca
FvH4_6g47640 Fragaria vesca
FvH4_7g10051 Fragaria vesca
Glyma.01G003100 Glycine max
Glyma.07G128900 Glycine max
Gohir.A06G196500 Gossypium hirsutum
Gohir.A10G042700 Gossypium hirsutum
Gohir.D06G204000 Gossypium hirsutum
Gohir.D07G160820 Gossypium hirsutum
Gohir.D10G043700 Gossypium hirsutum
Gorai.010G238000 Gossypium raimondii
Gorai.011G046500 Gossypium raimondii
GSVIVG01021533001 Vitis vinifera
HanXRQChr07g0199391 Helianthus annuus
HPP92_014792 Vanilla planifolia
Hund17773 Selenicereus undatus
Lalb_Chr14g0375331 Lupinus albus
Lalb_Chr22g0349731 Lupinus albus
Lj2g0013550 Lotus japonicus
Lsat_1_v5_gn_4_29580 Lactuca sativa
Manes.17G073200 Manihot esculenta
MBI18_g11238_MAGBIO Magnolia biondii
MD05G1280800 Malus domestica
MD10G1259200 Malus domestica
Medtr8g006645 Medicago truncatula
MELO3C007115.2 Cucumis melo
Migut.M00887 Erythranthe guttata
Nitab4.5_0000315g0010 Nicotiana tabacum
Nitab4.5_0005655g0060 Nicotiana tabacum
Nn3g20425 Nelumbo nucifera
Os09g0569450 Oryza sativa ssp. japonica
Peaxi162Scf00045g02430 Petunia axillaris
PGR083G2020 Punica granatum
Phvul.004G171100 Phaseolus vulgaris
Potri.004G133260 Populus trichocarpa
Prupe.4G084100 Prunus persica
Psat1g049440 Pisum sativum
PSO541G3638 Papaver somniferum
PSO675G4358 Papaver somniferum
QL05p055487 Quercus lobata
RcHm_v2.0_Chr5g0014561 Rosa chinensis
Sc05g0006030 Simmondsia chinensis
Sed0021444 Sechium edule
SGA_v2.0_scaffold1G00199 Striga asiatica
Solyc08g022120.3 Solanum lycopersicum
Sopen08g007660 Solanum pennellii
Sp7g15630 Schrenkiella parvula
TAR460G0007 Trochodendron aralioides
THA.LOC104798400 Tarenaya hassleriana
Thecc.06G146700 Theobroma cacao
Thhalv10026632m.g Eutrema salsugineum
TPR.G35503 Trifolium pratense
TWI09G0402 Tripterygium wilfordii
TWI73G0655 Tripterygium wilfordii
unitig_26.g9766 Utricularia gibba
vmacro03352 Vaccinium macrocarpon
vmacro05543 Vaccinium macrocarpon
VMungo0464G0906 Vigna mungo
Zm00001eb307790 Zea mays

User provided reference genes

Program Settings