Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia16220 Actinidia chinensis
Actinidia19363 Actinidia chinensis
Aqoxy3G01240 Aquilegia oxysepala
ATR0824G193 Amborella trichopoda
Atru.chr9.2584 Acer truncatum
AUR62008139 Chenopodium quinoa
AUR62028721 Chenopodium quinoa
CAN.G338.44 Capsicum annuum
CAN.G993.19 Capsicum annuum
CANSAT80G2717 Cannabis sativa
Ca_19418_v3 Cicer arietinum L.
Cc00_g26390 Coffea canephora
Cfa019224 Carpinus fangiana
Ciclev10022143m.g Citrus clementina
CiPaw.11G019200 Carya illinoinensis
CiPaw.12G031400 Carya illinoinensis
ClCG03G003020 Citrullus lanatus
Cpa.g.sc159.15 Carica papaya
CsaV3_1G008860 Cucumis sativus L.
CSS0019047 Camellia sinensis var. sinensis
DCAR_026175 Daucus carota
Dinv20596 Davidia involucrata
Dinv38523 Davidia involucrata
Duzib205G1010 Durio zibethinus
ECA232G2046 Erigeron canadensis
EL10Ac5g10650 Beta vulgaris
Eucgr.K02787 Eucalyptus grandis
FAN04G1252 Fragaria x ananassa
FAN08G3554 Fragaria x ananassa
FAN13G1050 Fragaria x ananassa
FAN18G0237 Fragaria x ananassa
FvH4_5g06340 Fragaria vesca
Glyma.04G188600 Glycine max
Glyma.05G041800 Glycine max
Glyma.06G177000 Glycine max
Glyma.06G177100 Glycine max
Glyma.06G177200 Glycine max
Glyma.17G124400 Glycine max
GSVIVG01007639001 Vitis vinifera
HanXRQChr10g0296021 Helianthus annuus
HanXRQChr16g0504731 Helianthus annuus
Haze_07592 Corylus avellana
Hma1.2p1_1092F.1_g255950 Hydrangea macrophylla
HPP92_023366 Vanilla planifolia
Hund02789 Selenicereus undatus
Lalb_Chr07g0182991 Lupinus albus
Lalb_Chr12g0201911 Lupinus albus
Lj1g0001041 Lotus japonicus
Lj4g0006123 Lotus japonicus
Lj9C442T3 Lonicera japonica
Lsat_1_v5_gn_4_77360 Lactuca sativa
Manes.06G110900 Manihot esculenta
Manes.14G060400 Manihot esculenta
MBI10_g11212_MAGBIO Magnolia biondii
MBI18_g22703_MAGBIO Magnolia biondii
MD02G1231100 Malus domestica
MD06G1165500 Malus domestica
MD14G1171000 Malus domestica
Medtr4g104770 Medicago truncatula
MELO3C002301.2 Cucumis melo
Migut.O00162 Erythranthe guttata
MSTRG.11498 Avicennia marina
MSTRG.23169 Avicennia marina
Nitab4.5_0000003g0830 Nicotiana tabacum
Nitab4.5_0002522g0010 Nicotiana tabacum
Nitab4.5_0008713g0010 Nicotiana tabacum
Nitab4.5_0008913g0040 Nicotiana tabacum
Nn4g22584 Nelumbo nucifera
Oeu020883.2 Olea europaea
Oeu036500.2 Olea europaea
Os01g0971100 Oryza sativa ssp. japonica
Os05g0107900 Oryza sativa ssp. japonica
Peaxi162Scf00089g01332 Petunia axillaris
Peaxi162Scf00089g01333 Petunia axillaris
Peaxi162Scf00763g00438 Petunia axillaris
PGSC0003DMG400018127 Solanum tuberosum
PGSC0003DMG400027072 Solanum tuberosum
Phvul.003G205500 Phaseolus vulgaris
Phvul.009G173300 Phaseolus vulgaris
Phvul.009G173400 Phaseolus vulgaris
Potri.012G086500 Populus trichocarpa
Prupe.5G165100 Prunus persica
Psat4g060640 Pisum sativum
PSO063G6095 Papaver somniferum
PSO754G0088 Papaver somniferum
QL10p006845 Quercus lobata
RcHm_v2.0_Chr7g0192501 Rosa chinensis
Rhsim08G0178100 Rhododendron simsii
Sabra12G0061900 Salix brachista
SalBow5G1579 Salvia bowleyana
Sc10g0010220 Simmondsia chinensis
Sed0003121 Sechium edule
SGA_v2.0_scaffold25G10795 Striga asiatica
SMO356G0068 Selaginella moellendorffii
Solyc03g112160.3 Solanum lycopersicum
Solyc06g071780.4 Solanum lycopersicum
Sopen03g031250 Solanum pennellii
Sopen06g028070 Solanum pennellii
TAR371G0994 Trochodendron aralioides
TAR622G0608 Trochodendron aralioides
TAR629G0635 Trochodendron aralioides
THA.LOC104809243 Tarenaya hassleriana
Thecc.03G026300 Theobroma cacao
TPR.G37502 Trifolium pratense
TWI14G0880 Tripterygium wilfordii
vmacro19293 Vaccinium macrocarpon
VMungo1215G0788 Vigna mungo
VMungo1309G3046 Vigna mungo
Zm00001eb130380 Zea mays
Zm00001eb139880 Zea mays
Zm00001eb345470 Zea mays

User provided reference genes

Program Settings