Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p32400 Brassica napus
Aa31LG1G21530 Aethionema arabicum
Actinidia10401 Actinidia chinensis
Ah.08g210920 Amaranthus hybridus
AL6G13210 Arabidopsis lyrata
Aqoxy2G01383 Aquilegia oxysepala
AT5G03700 Arabidopsis thaliana
ATR0820G126 Amborella trichopoda
Atru.chr8.1630 Acer truncatum
AUR62041423 Chenopodium quinoa
BcaC06g32078 Brassica carinata
BolC9t60057H Brassica oleracea
BraA10t45280Z Brassica rapa
C09p73220 Brassica napus
CAN.G824.23 Capsicum annuum
CANSAT80G2488 Cannabis sativa
CARHR209600 Cardamine hirsuta
Carub.0006s0261 Capsella rubella
Ca_08967_v3 Cicer arietinum L.
Cc06_g05300 Coffea canephora
CDE06G0529 Ceratophyllum demersum
CDE08G0973 Ceratophyllum demersum
Cfa016536 Carpinus fangiana
Ciclev10011506m.g Citrus clementina
CiPaw.09G008900 Carya illinoinensis
CiPaw.10G005600 Carya illinoinensis
CiPaw.11G177800 Carya illinoinensis
ClCG10G019320 Citrullus lanatus
COL.COLO4_29812 Corchorus olitorius
Cpa.g.sc5.74 Carica papaya
CsaV3_3G036870 Cucumis sativus L.
DCAR_013358 Daucus carota
Dinv21252 Davidia involucrata
Duzib093G1239 Durio zibethinus
EL10Ac7g16988 Beta vulgaris
Eucgr.A01540 Eucalyptus grandis
FAN02G1483 Fragaria x ananassa
FAN09G3552 Fragaria x ananassa
FAN14G3525 Fragaria x ananassa
FvH4_6g17930 Fragaria vesca
Glyma.03G191300 Glycine max
Glyma.19G192000 Glycine max
Gohir.A09G135900 Gossypium hirsutum
Gohir.D09G137400 Gossypium hirsutum
Gorai.006G157800 Gossypium raimondii
GSVIVG01033786001 Vitis vinifera
HanXRQChr01g0028861 Helianthus annuus
HanXRQChr01g0028871 Helianthus annuus
Haze_19541 Corylus avellana
HPP92_009052 Vanilla planifolia
Lalb_Chr25g0288651 Lupinus albus
Lj1g0006313 Lotus japonicus
Lj2P129T48 Lonicera japonica
Lsat_1_v5_gn_1_50160 Lactuca sativa
Lsat_1_v5_gn_6_70961 Lactuca sativa
Manes.08G021200 Manihot esculenta
MBI01_g28139_MAGBIO Magnolia biondii
MD12G1018400 Malus domestica
MD14G1016400 Malus domestica
Medtr7g103870 Medicago truncatula
MELO3C009435.2 Cucumis melo
Migut.J00981 Erythranthe guttata
MSTRG.19232 Avicennia marina
MSTRG.5808 Avicennia marina
Nitab4.5_0000663g0020 Nicotiana tabacum
Nitab4.5_0001698g0020 Nicotiana tabacum
Nn1g03244 Nelumbo nucifera
Nn1g08507 Nelumbo nucifera
Nn3g21248 Nelumbo nucifera
Nn6g35037 Nelumbo nucifera
Oeu039827.1 Olea europaea
Os02g0527900 Oryza sativa ssp. japonica
Os11g0149900 Oryza sativa ssp. japonica
Peaxi162Scf00169g00113 Petunia axillaris
PGR004G0775 Punica granatum
PGSC0003DMG400042886 Solanum tuberosum
Phvul.001G186800 Phaseolus vulgaris
Potri.008G016900 Populus trichocarpa
Pp3c21_16810 Physcomitrium patens
Pp3c22_1330 Physcomitrium patens
Prupe.7G116800 Prunus persica
Psat3g035800 Pisum sativum
PSO384G3911 Papaver somniferum
QL07p040458 Quercus lobata
RcHm_v2.0_Chr3g0472201 Rosa chinensis
Rhsim04G0135700 Rhododendron simsii
Sabra08G0010600 Salix brachista
Sabra10G0188400 Salix brachista
Sed0025349 Sechium edule
SEGI_09578 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15397 Striga asiatica
SHI23896 Sapria himalayana
SMO356G0591 Selaginella moellendorffii
Solyc09g009150.1 Solanum lycopersicum
Sopen09g003870 Solanum pennellii
Sp6g39020 Schrenkiella parvula
TAR623G1073 Trochodendron aralioides
THA.LOC104816370 Tarenaya hassleriana
Thecc.05G081400 Theobroma cacao
Thhalv10013395m.g Eutrema salsugineum
TPR.G10250 Trifolium pratense
TWI53G1758 Tripterygium wilfordii
unitig_578.g15769 Utricularia gibba
VMungo1383G1296 Vigna mungo
Zm00001eb185460 Zea mays
Zm00001eb196790 Zea mays
Zm00001eb196800 Zea mays
Zm00001eb196830 Zea mays
Zm00001eb242570 Zea mays
Zm00001eb265570 Zea mays
Zm00001eb406550 Zea mays

User provided reference genes

Program Settings