Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p06500 Brassica napus
Aa31LG5G19700 Aethionema arabicum
Actinidia29673 Actinidia chinensis
AL4G37500 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.10ZGUJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6C4W0P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A3NAV6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IY3N90 Arachis hypogaea
AT2G39920 Arabidopsis thaliana
ATR0618G335 Amborella trichopoda
Atru.chr12.252 Acer truncatum
BcaB02g09071 Brassica carinata
BcaB06g26858 Brassica carinata
BcaC02g12125 Brassica carinata
BolC4t22375H Brassica oleracea
BraA05t19618Z Brassica rapa
C04p07590 Brassica napus
CARHR134840 Cardamine hirsuta
Carub.0004s2205 Capsella rubella
Ca_05926_v3 Cicer arietinum L.
Ca_17141_v3 Cicer arietinum L.
Cc02_g06970 Coffea canephora
Ciclev10033883m.g Citrus clementina
CiPaw.01G295300 Carya illinoinensis
ClCG07G003900 Citrullus lanatus
COL.COLO4_25671 Corchorus olitorius
Cpa.g.sc19.223 Carica papaya
CsaV3_5G008850 Cucumis sativus L.
CSS0012253 Camellia sinensis var. sinensis
CSS0014435 Camellia sinensis var. sinensis
DCAR_024839 Daucus carota
Dinv20946 Davidia involucrata
Dinv20949 Davidia involucrata
Dinv20994 Davidia involucrata
Dinv20997 Davidia involucrata
Duzib106G0752 Durio zibethinus
Duzib114G0863 Durio zibethinus
ECA233G0306 Erigeron canadensis
ECA238G4046 Erigeron canadensis
Eucgr.G03025 Eucalyptus grandis
FAN01G0283 Fragaria x ananassa
FAN03G3227 Fragaria x ananassa
FAN06G2291 Fragaria x ananassa
FAN10G1282 Fragaria x ananassa
FvH4_7g23940 Fragaria vesca
Glyma.02G253900 Glycine max
Glyma.11G226700 Glycine max
Glyma.14G062600 Glycine max
Glyma.18G030500 Glycine max
Gohir.A05G346200 Gossypium hirsutum
Gohir.A10G228900 Gossypium hirsutum
Gohir.D04G066400 Gossypium hirsutum
Gohir.D10G242900 Gossypium hirsutum
Gorai.011G279300 Gossypium raimondii
Gorai.012G075200 Gossypium raimondii
GSVIVG01016377001 Vitis vinifera
HanXRQChr07g0202311 Helianthus annuus
HanXRQChr12g0369331 Helianthus annuus
HanXRQChr14g0458841 Helianthus annuus
Haze_17176 Corylus avellana
Hma1.2p1_0710F.1_g207380 Hydrangea macrophylla
HPP92_015339 Vanilla planifolia
Lalb_Chr10g0104981 Lupinus albus
Lj1A949T61 Lonicera japonica
Lj6g0016213 Lotus japonicus
LjContig00357g0002291 Lotus japonicus
Lsat_1_v5_gn_2_120641 Lactuca sativa
Manes.10G018300 Manihot esculenta
MBI02_g42753_MAGBIO Magnolia biondii
MBI05_g03441_MAGBIO Magnolia biondii
MD01G1146100 Malus domestica
MD01G1146200 Malus domestica
MD07G1213100 Malus domestica
Medtr3g070090 Medicago truncatula
Medtr5g081740 Medicago truncatula
Medtr7g092870 Medicago truncatula
Medtr7g092875 Medicago truncatula
MELO3C025147.2 Cucumis melo
Migut.F00708 Erythranthe guttata
Nn2g13598 Nelumbo nucifera
Nn2g15918 Nelumbo nucifera
Oeu006657.1 Olea europaea
Oeu006658.1 Olea europaea
PGR142G1076 Punica granatum
Phvul.001G240100 Phaseolus vulgaris
Phvul.008G227000 Phaseolus vulgaris
Potri.010G193500 Populus trichocarpa
Prupe.2G245400 Prunus persica
Psat2g036160 Pisum sativum
Psat5g127360 Pisum sativum
PSO339G3533 Papaver somniferum
PSO384G2074 Papaver somniferum
QL08p062549 Quercus lobata
RcHm_v2.0_Chr1g0369271 Rosa chinensis
Rhsim03G0139600 Rhododendron simsii
Sabra10G0149000 Salix brachista
SalBow5G0486 Salvia bowleyana
Sc10g0002160 Simmondsia chinensis
Sed0026510 Sechium edule
Sp4g22230 Schrenkiella parvula
TAR623G0945 Trochodendron aralioides
THA.LOC104810069 Tarenaya hassleriana
Thecc.10G027200 Theobroma cacao
Thhalv10017044m.g Eutrema salsugineum
TPR.G29801 Trifolium pratense
TPR.G3963 Trifolium pratense
TPR.G40054 Trifolium pratense
TPR.G8053 Trifolium pratense
TWI73G0069 Tripterygium wilfordii
vmacro07000 Vaccinium macrocarpon
VMungo0647G1533 Vigna mungo
VMungo1383G1034 Vigna mungo

User provided reference genes

Program Settings