Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p49100 Brassica napus
Aa31LG9G2000 Aethionema arabicum
Actinidia03602 Actinidia chinensis
Ah.09g232170 Amaranthus hybridus
AL7G40110 Arabidopsis lyrata
Aqoxy1G03051 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RPFA7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5WKYJ Arachis hypogaea
AT4G15440 Arabidopsis thaliana
ATR0681G188 Amborella trichopoda
ATR0681G341 Amborella trichopoda
Atru.chr6.3227 Acer truncatum
AUR62027399 Chenopodium quinoa
AUR62031312 Chenopodium quinoa
BcaC06g32934 Brassica carinata
BcaC06g33407 Brassica carinata
BolC7t45235H Brassica oleracea
BraA03t14005Z Brassica rapa
C07p47140 Brassica napus
CAN.G290.8 Capsicum annuum
CANSAT64G1222 Cannabis sativa
CARHR222200 Cardamine hirsuta
Carub.0007s2648 Capsella rubella
Ca_01615_v3 Cicer arietinum L.
Cc05_g03650 Coffea canephora
Cfa014340 Carpinus fangiana
Ciclev10014991m.g Citrus clementina
CiPaw.04G113000 Carya illinoinensis
ClCG02G002090 Citrullus lanatus
COL.COLO4_21836 Corchorus olitorius
Cpa.g.sc1880.1 Carica papaya
CsaV3_7G003410 Cucumis sativus L.
CSS0023501 Camellia sinensis var. sinensis
DCAR_012937 Daucus carota
DCAR_019264 Daucus carota
Dinv08746 Davidia involucrata
Dinv39730 Davidia involucrata
Duzib138G0376 Durio zibethinus
Duzib211G0414 Durio zibethinus
ECA236G1761 Erigeron canadensis
EL10Ac8g19325 Beta vulgaris
Eucgr.K00776 Eucalyptus grandis
FAN02G4599 Fragaria x ananassa
FAN05G3573 Fragaria x ananassa
FAN09G1064 Fragaria x ananassa
FAN11G0183 Fragaria x ananassa
FAN14G1486 Fragaria x ananassa
FvH4_3g17250 Fragaria vesca
FvH4_6g42740 Fragaria vesca
Glyma.12G191400 Glycine max
Gohir.A11G154300 Gossypium hirsutum
Gohir.D11G161100 Gossypium hirsutum
Gorai.007G171600 Gossypium raimondii
GSVIVG01030474001 Vitis vinifera
HanXRQChr04g0126981 Helianthus annuus
HanXRQChr16g0506541 Helianthus annuus
Haze_12801 Corylus avellana
Hma1.2p1_0842F.1_g227090 Hydrangea macrophylla
Hma1.2p1_0842F.1_g227100 Hydrangea macrophylla
Hma1.2p1_1630F.1_g294570 Hydrangea macrophylla
HPP92_008824 Vanilla planifolia
Hund10224 Selenicereus undatus
Lalb_Chr14g0375871 Lupinus albus
Lj1C778T5 Lonicera japonica
Lj1P773T27 Lonicera japonica
Lj8A127T47 Lonicera japonica
LjContig00274_ERROPOS1100000g0011669 Lotus japonicus
Lsat_1_v5_gn_7_93220 Lactuca sativa
Manes.12G072001 Manihot esculenta
MBI07_g01732_MAGBIO Magnolia biondii
MD09G1071400 Malus domestica
MD17G1100800 Malus domestica
Medtr2g087890 Medicago truncatula
MELO3C018833.2 Cucumis melo
Migut.M00433 Erythranthe guttata
Migut.M00434 Erythranthe guttata
MSTRG.6581 Avicennia marina
Nitab4.5_0000130g0230 Nicotiana tabacum
Nitab4.5_0006248g0010 Nicotiana tabacum
Nitab4.5_0015407g0010 Nicotiana tabacum
Nn1g00066 Nelumbo nucifera
Oeu019005.1 Olea europaea
Os02g0110200 Oryza sativa ssp. japonica
Peaxi162Scf00007g00122 Petunia axillaris
PGR142G0750 Punica granatum
PGSC0003DMG400001078 Solanum tuberosum
Phvul.005G116800 Phaseolus vulgaris
Potri.014G155800 Populus trichocarpa
Prupe.3G213800 Prunus persica
Psat5g263320 Pisum sativum
PSO541G1925 Papaver somniferum
PSO675G5759 Papaver somniferum
QL08p031583 Quercus lobata
RcHm_v2.0_Chr2g0158631 Rosa chinensis
Rhsim04G0052300 Rhododendron simsii
Sabra14G0117800 Salix brachista
SalBow7G3133 Salvia bowleyana
Sc06g0009600 Simmondsia chinensis
Sed0018917 Sechium edule
SGA_v2.0_scaffold34G13756 Striga asiatica
Solyc07g049690.3 Solanum lycopersicum
Sopen07g025290 Solanum pennellii
Sp7g13660 Schrenkiella parvula
TAR624G1244 Trochodendron aralioides
THA.LOC104820221 Tarenaya hassleriana
Thecc.01G177900 Theobroma cacao
Thhalv10025050m.g Eutrema salsugineum
TPR.G4240 Trifolium pratense
TWI36G0969 Tripterygium wilfordii
vmacro09344 Vaccinium macrocarpon
VMungo1080G1732 Vigna mungo
Zm00001eb209760 Zea mays

User provided reference genes

Program Settings