Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p17620 Brassica napus
Aa31LG1G15680 Aethionema arabicum
Aa31LG2G10090 Aethionema arabicum
Actinidia08166 Actinidia chinensis
Ah.03g132670 Amaranthus hybridus
AL2G16430 Arabidopsis lyrata
Aqoxy3G01006 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CT1PYC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I0S28J Arachis hypogaea
AT1G60230 Arabidopsis thaliana
ATR0730G221 Amborella trichopoda
Atru.chr11.2017 Acer truncatum
AUR62005375 Chenopodium quinoa
AUR62014037 Chenopodium quinoa
BcaB07g31206 Brassica carinata
BcaC04g22221 Brassica carinata
BolC9t55100H Brassica oleracea
BraA09t37392Z Brassica rapa
C09p21950 Brassica napus
CAN.G376.6 Capsicum annuum
CANSAT01G1716 Cannabis sativa
CARHR052730 Cardamine hirsuta
Carub.0002s0502 Capsella rubella
Ca_22725_v3 Cicer arietinum L.
Ca_22727_v3 Cicer arietinum L.
Cc11_g14650 Coffea canephora
CDE05G1394 Ceratophyllum demersum
Cfa009141 Carpinus fangiana
Ciclev10031376m.g Citrus clementina
CiPaw.06G072300 Carya illinoinensis
ClCG08G018080 Citrullus lanatus
COL.COLO4_36967 Corchorus olitorius
Cpa.g.sc69.29 Carica papaya
Cre02.g086550 Chlamydomonas reinhardtii
Cre02.g109250 Chlamydomonas reinhardtii
CsaV3_4G037870 Cucumis sativus L.
CSS0013957 Camellia sinensis var. sinensis
DCAR_031101 Daucus carota
Dinv24861 Davidia involucrata
Duzib268G1537 Durio zibethinus
ECA234G2022 Erigeron canadensis
Eucgr.B03346 Eucalyptus grandis
FAN07G1170 Fragaria x ananassa
FAN12G4310 Fragaria x ananassa
FAN17G0819 Fragaria x ananassa
FAN22G2343 Fragaria x ananassa
FvH4_4g34530 Fragaria vesca
Glyma.08G287600 Glycine max
Gohir.A12G142700 Gossypium hirsutum
Gohir.D12G147500 Gossypium hirsutum
Gorai.008G158700 Gossypium raimondii
GSVIVG01007579001 Vitis vinifera
GSVIVG01020239001 Vitis vinifera
HanXRQChr12g0383481 Helianthus annuus
Haze_12175 Corylus avellana
Haze_27405 Corylus avellana
HPP92_021345 Vanilla planifolia
Hund25345 Selenicereus undatus
Lalb_Chr05g0228161 Lupinus albus
Lj3C1052T11 Lonicera japonica
Lj4g0006314 Lotus japonicus
Lsat_1_v5_gn_4_5880 Lactuca sativa
Manes.12G029233 Manihot esculenta
Mapoly0003s0274 Marchantia polymorpha
MBI16_g26452_MAGBIO Magnolia biondii
MD16G1092200 Malus domestica
Medtr8g064490 Medicago truncatula
MELO3C017082.2 Cucumis melo
Migut.L01411 Erythranthe guttata
Nitab4.5_0000113g0310 Nicotiana tabacum
Nitab4.5_0002494g0050 Nicotiana tabacum
Nitab4.5_0004308g0070 Nicotiana tabacum
Nitab4.5_0015019g0020 Nicotiana tabacum
Nn4g22802 Nelumbo nucifera
Oeu056396.1 Olea europaea
Os01g0640800 Oryza sativa ssp. japonica
Peaxi162Scf00338g00228 Petunia axillaris
PGR102G2178 Punica granatum
PGSC0003DMG400030992 Solanum tuberosum
Phvul.003G052100 Phaseolus vulgaris
Potri.010G040700 Populus trichocarpa
Pp3c5_4340 Physcomitrium patens
PRCOL_00002417 Prasinoderma coloniale
Prupe.1G254200 Prunus persica
Psat4g125320 Pisum sativum
PSO017G3957 Papaver somniferum
PSO478G2278 Papaver somniferum
QL03p061251 Quercus lobata
RcHm_v2.0_Chr4g0443901 Rosa chinensis
Rhsim12G0047100 Rhododendron simsii
RhsimUnG0091100 Rhododendron simsii
Sabra10G0026400 Salix brachista
SalBow2G2445 Salvia bowleyana
Sc14g0008630 Simmondsia chinensis
Sed0004749 Sechium edule
SGA_v2.0_scaffold8G04225 Striga asiatica
Solyc02g044020.3 Solanum lycopersicum
Solyc05g005590.4 Solanum lycopersicum
Sopen05g001600 Solanum pennellii
Sp2g04450 Schrenkiella parvula
SpUn0106_0020 Schrenkiella parvula
TAR374G0920 Trochodendron aralioides
TAR374G1145 Trochodendron aralioides
THA.LOC104809600 Tarenaya hassleriana
Thecc.02G248400 Theobroma cacao
Thhalv10023456m.g Eutrema salsugineum
TPR.G32115 Trifolium pratense
TWI36G1303 Tripterygium wilfordii
unitig_749.g13270 Utricularia gibba
unitig_749.g13272 Utricularia gibba
vmacro01181 Vaccinium macrocarpon
VMungo0251G2401 Vigna mungo
Zm00001eb359210 Zea mays

User provided reference genes

Program Settings