Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia30485 Actinidia chinensis
Actinidia39298 Actinidia chinensis
AL3G53930 Arabidopsis lyrata
Aqoxy1G02752 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4122HZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92XMB3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ATG8WK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RA1C4M Arachis hypogaea
AT2G20616 Arabidopsis thaliana
AT2G20815 Arabidopsis thaliana
ATR0693G056 Amborella trichopoda
ATR0693G121 Amborella trichopoda
ATR0703G001 Amborella trichopoda
ATR1039G001 Amborella trichopoda
Atru.chr6.3062 Acer truncatum
BcaC06g36770 Brassica carinata
BolC7t40463H Brassica oleracea
BraA07t27788Z Brassica rapa
C07p00120 Brassica napus
CAN.G248.59 Capsicum annuum
CANSAT64G1209 Cannabis sativa
CARHR046100 Cardamine hirsuta
CARHR111500 Cardamine hirsuta
Carub.0003s3539 Capsella rubella
Ca_01534_v3 Cicer arietinum L.
Cc05_g06430 Coffea canephora
Cfa014550 Carpinus fangiana
Cfa019517 Carpinus fangiana
Cfa021257 Carpinus fangiana
Ciclev10017570m.g Citrus clementina
CiPaw.04G123000 Carya illinoinensis
ClCG02G017370 Citrullus lanatus
Cpa.g.sc34.106 Carica papaya
CsaV3_6G012470 Cucumis sativus L.
DCAR_012985 Daucus carota
Dinv15478 Davidia involucrata
Dinv23702 Davidia involucrata
Duzib248G0813 Durio zibethinus
ECA246G0759 Erigeron canadensis
Eucgr.A01785 Eucalyptus grandis
FAN02G0524 Fragaria x ananassa
FAN05G1593 Fragaria x ananassa
FAN14G1122 Fragaria x ananassa
Glyma.06G298000 Glycine max
Glyma.12G107200 Glycine max
Glyma.12G107401 Glycine max
Glyma.13G300600 Glycine max
Gohir.A12G136800 Gossypium hirsutum
Gorai.008G152100 Gossypium raimondii
GSVIVG01030582001 Vitis vinifera
HanXRQChr10g0297061 Helianthus annuus
HanXRQChr17g0542491 Helianthus annuus
Haze_13095 Corylus avellana
HPP92_017629 Vanilla planifolia
Lalb_Chr14g0366661 Lupinus albus
Lj2g0015341 Lotus japonicus
Lj3g0000685 Lotus japonicus
Lj3g0004709 Lotus japonicus
Lsat_1_v5_gn_3_39221 Lactuca sativa
Lsat_1_v5_gn_4_70320 Lactuca sativa
Manes.05G121400 Manihot esculenta
MBI02_g35905_MAGBIO Magnolia biondii
MBI05_g33210_MAGBIO Magnolia biondii
MBI05_g33211_MAGBIO Magnolia biondii
MBI05_g42458_MAGBIO Magnolia biondii
MD09G1092900 Malus domestica
MD17G1083000 Malus domestica
Medtr2g090050 Medicago truncatula
MELO3C013532.2 Cucumis melo
Migut.H01022 Erythranthe guttata
Nitab4.5_0000146g0110 Nicotiana tabacum
Nitab4.5_0000146g0120 Nicotiana tabacum
Nitab4.5_0001090g0030 Nicotiana tabacum
Nitab4.5_0003018g0010 Nicotiana tabacum
Nn1g03917 Nelumbo nucifera
Oeu005830.1 Olea europaea
Oeu032188.1 Olea europaea
Peaxi162Scf00132g00729 Petunia axillaris
Peaxi162Scf00132g00730 Petunia axillaris
PGR042G3402 Punica granatum
PGSC0003DMG400014122 Solanum tuberosum
PGSC0003DMG400018319 Solanum tuberosum
PGSC0003DMG400025949 Solanum tuberosum
PGSC0003DMG400034071 Solanum tuberosum
Phvul.005G107400 Phaseolus vulgaris
Phvul.011G112000 Phaseolus vulgaris
Potri.013G146100 Populus trichocarpa
Prupe.3G232200 Prunus persica
Psat5g270000 Pisum sativum
PSO541G2384 Papaver somniferum
PSO675G1637 Papaver somniferum
QL08p037487 Quercus lobata
RcHm_v2.0_Chr2g0161991 Rosa chinensis
Rhsim04G0065600 Rhododendron simsii
Sabra13G0117900 Salix brachista
SalBow1G7770 Salvia bowleyana
Sc21g0002450 Simmondsia chinensis
Sed0008278 Sechium edule
Sed0017549 Sechium edule
SEGI_04100 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37628 Striga asiatica
Solyc07g054390.1 Solanum lycopersicum
Sopen07g028330 Solanum pennellii
Sp3g34040 Schrenkiella parvula
TAR624G1068 Trochodendron aralioides
THA.LOC109117133 Tarenaya hassleriana
Thecc.02G172500 Theobroma cacao
Thhalv10002328m.g Eutrema salsugineum
TPR.G27112 Trifolium pratense
TWI36G0041 Tripterygium wilfordii
VMungo0647G2518 Vigna mungo
VMungo1127G0566 Vigna mungo
VMungo1127G1518 Vigna mungo
Zm00001eb049060 Zea mays

User provided reference genes

Program Settings