Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p07140 Brassica napus
Aa31LG4G7230 Aethionema arabicum
Actinidia15201 Actinidia chinensis
Actinidia24726 Actinidia chinensis
AL2G37400 Arabidopsis lyrata
Aqoxy6G00289 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea
AT1G77230 Arabidopsis thaliana
ATR0584G163 Amborella trichopoda
Atru.chr13.1599 Acer truncatum
AUR62007695 Chenopodium quinoa
AUR62013448 Chenopodium quinoa
BcaB02g07099 Brassica carinata
BcaC08g45484 Brassica carinata
BolC6t38274H Brassica oleracea
BraA08t32726Z Brassica rapa
C06p31380 Brassica napus
CAN.G46.11 Capsicum annuum
CANSAT64G0796 Cannabis sativa
CARHR070700 Cardamine hirsuta
Carub.0002s2410 Capsella rubella
Ca_12642_v3 Cicer arietinum L.
CBR_g52628 Chara braunii
Cc10_g14010 Coffea canephora
CDE06G1932 Ceratophyllum demersum
Cfa018414 Carpinus fangiana
Ciclev10002542m.g Citrus clementina
CiPaw.16G022000 Carya illinoinensis
ClCG08G006070 Citrullus lanatus
COL.COLO4_32963 Corchorus olitorius
Cpa.g.sc64.158 Carica papaya
Cre12.g510034 Chlamydomonas reinhardtii
CsaV3_6G033990 Cucumis sativus L.
CSS0009415 Camellia sinensis var. sinensis
CSS0019542 Camellia sinensis var. sinensis
CSS0036249 Camellia sinensis var. sinensis
DCAR_028201 Daucus carota
Dinv27258 Davidia involucrata
Duzib093G2176 Durio zibethinus
EL10Ac1g01371 Beta vulgaris
Eucgr.F03861 Eucalyptus grandis
FAN04G1857 Fragaria x ananassa
FAN08G3479 Fragaria x ananassa
FAN20G3215 Fragaria x ananassa
FAN24G0315 Fragaria x ananassa
FAN24G1784 Fragaria x ananassa
FAN27G2285 Fragaria x ananassa
FAN27G3284 Fragaria x ananassa
FvH4_2g28060 Fragaria vesca
Glyma.13G035500 Glycine max
Glyma.14G156700 Glycine max
Gohir.A05G238900 Gossypium hirsutum
Gohir.D05G240800 Gossypium hirsutum
Gorai.009G249600 Gossypium raimondii
GSVIVG01008793001 Vitis vinifera
HanXRQChr02g0045531 Helianthus annuus
Haze_17647 Corylus avellana
Haze_17648 Corylus avellana
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla
HPP92_016131 Vanilla planifolia
Hund17359 Selenicereus undatus
Lalb_Chr04g0253591 Lupinus albus
Lj1g0023549 Lotus japonicus
Lj4A663T33 Lonicera japonica
Lj4A666T17 Lonicera japonica
Lsat_1_v5_gn_1_10340 Lactuca sativa
Manes.18G084200 Manihot esculenta
Mapoly0050s0106 Marchantia polymorpha
MBI03_g13506_MAGBIO Magnolia biondii
MD15G1131600 Malus domestica
Medtr1g029720 Medicago truncatula
MELO3C008461.2 Cucumis melo
Migut.C01073 Erythranthe guttata
MSTRG.1406 Avicennia marina
Nitab4.5_0002625g0010 Nicotiana tabacum
Nitab4.5_0008327g0010 Nicotiana tabacum
Nn1g08935 Nelumbo nucifera
Oeu026374.1 Olea europaea
Os02g0553500 Oryza sativa ssp. japonica
Peaxi162Scf00066g00072 Petunia axillaris
PGR042G0886 Punica granatum
PGSC0003DMG402018005 Solanum tuberosum
PGSC0003DMG403018005 Solanum tuberosum
Phvul.001G066600 Phaseolus vulgaris
Potri.002G076700 Populus trichocarpa
Prupe.1G487500 Prunus persica
Psat6g040840 Pisum sativum
PSO170G0856 Papaver somniferum
PSO528G0249 Papaver somniferum
QL09p031413 Quercus lobata
QL09p031824 Quercus lobata
RcHm_v2.0_Chr6g0296961 Rosa chinensis
RcHm_v2.0_Chr6g0296981 Rosa chinensis
RcHm_v2.0_Chr6g0297021 Rosa chinensis
Sabra02G0060200 Salix brachista
SalBow7G4180 Salvia bowleyana
Sc26g0002850 Simmondsia chinensis
Sed0020251 Sechium edule
SEGI_04582 Sequoiadendron giganteum
SEGI_05118 Sequoiadendron giganteum
SGA_v2.0_scaffold52G18911 Striga asiatica
Solyc04g058200.3 Solanum lycopersicum
Sopen04g026100 Solanum pennellii
Sp5g32400 Schrenkiella parvula
TAR381G0659 Trochodendron aralioides
THA.LOC104813687 Tarenaya hassleriana
Thecc.08G134700 Theobroma cacao
Thhalv10019109m.g Eutrema salsugineum
TPR.G879 Trifolium pratense
TWI32G1355 Tripterygium wilfordii
VMungo0647G0259 Vigna mungo
Zm00001eb181980 Zea mays

User provided reference genes

Program Settings