Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p03430 Brassica napus
Aa31LG10G4130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.471 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis
Actinidia04394 Actinidia chinensis
Actinidia27998 Actinidia chinensis
Ah.01g007020 Amaranthus hybridus
Ah.01g007040 Amaranthus hybridus
AL1G57570 Arabidopsis lyrata
Aqoxy1G00265 Aquilegia oxysepala
Aqoxy335s004 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea
AT1G50000 Arabidopsis thaliana
ATR0739G203 Amborella trichopoda
Atru.chr5.2305 Acer truncatum
AUR62027019 Chenopodium quinoa
AUR62030859 Chenopodium quinoa
BcaB07g33452 Brassica carinata
BcaC08g43178 Brassica carinata
BolC6t35607H Brassica oleracea
BraA06t23551Z Brassica rapa
C06p04780 Brassica napus
CAN.G606.69 Capsicum annuum
CANSAT25G3386 Cannabis sativa
CARHR040100 Cardamine hirsuta
Carub.0151s0002 Capsella rubella
Ca_11027_v3 Cicer arietinum L.
CBR_g48696 Chara braunii
Cc00_g17990 Coffea canephora
CDE04G1257 Ceratophyllum demersum
Cfa004705 Carpinus fangiana
Cfa004706 Carpinus fangiana
Ciclev10030269m.g Citrus clementina
CiPaw.05G020500 Carya illinoinensis
ClCG02G007120 Citrullus lanatus
COL.COLO4_32489 Corchorus olitorius
Cre03.g175800 Chlamydomonas reinhardtii
CsaV3_7G007700 Cucumis sativus L.
CSS0011887 Camellia sinensis var. sinensis
DCAR_001738 Daucus carota
Dinv09541 Davidia involucrata
ECA240G3857 Erigeron canadensis
EL10Ac9g22185 Beta vulgaris
Eucgr.I02493 Eucalyptus grandis
FAN15G2988 Fragaria x ananassa
FAN24G0164 Fragaria x ananassa
FAN24G1144 Fragaria x ananassa
FvH4_2g03440 Fragaria vesca
Glyma.20G135600 Glycine max
Gohir.A12G018701 Gossypium hirsutum
Gohir.D12G019200 Gossypium hirsutum
Gorai.008G019500 Gossypium raimondii
GSVIVG01037056001 Vitis vinifera
HanXRQChr03g0072921 Helianthus annuus
Haze_10309 Corylus avellana
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla
HPP92_026588 Vanilla planifolia
Lalb_Chr06g0165001 Lupinus albus
Lj1g0020001 Lotus japonicus
Lj9A337T44 Lonicera japonica
Lsat_1_v5_gn_9_113380 Lactuca sativa
Manes.07G057400 Manihot esculenta
Manes.10G086502 Manihot esculenta
Mapoly0081s0053 Marchantia polymorpha
MBI16_g16470_MAGBIO Magnolia biondii
MCO02G312 Micromonas commoda
MD10G1109100 Malus domestica
Medtr1g106055 Medicago truncatula
MELO3C018530.2 Cucumis melo
Migut.B00460 Erythranthe guttata
MSTRG.20236 Avicennia marina
Nitab4.5_0001099g0070 Nicotiana tabacum
Nitab4.5_0010145g0020 Nicotiana tabacum
Nn5g30645 Nelumbo nucifera
Os03g0729700 Oryza sativa ssp. japonica
Peaxi162Scf00016g03020 Petunia axillaris
PGR142G1084 Punica granatum
PGSC0003DMG402025733 Solanum tuberosum
Phvul.007G046900 Phaseolus vulgaris
Potri.001G290100 Populus trichocarpa
Pp3c3_17050 Physcomitrium patens
PRCOL_00000434 Prasinoderma coloniale
Prupe.8G149200 Prunus persica
Psat6g214440 Pisum sativum
PSO017G1092 Papaver somniferum
PSO170G6576 Papaver somniferum
QL11p029473 Quercus lobata
RcHm_v2.0_Chr6g0248571 Rosa chinensis
RcHm_v2.0_Chr6g0248601 Rosa chinensis
Rhsim05G0092700 Rhododendron simsii
Sabra16G0181700 Salix brachista
SalBow6G4520 Salvia bowleyana
Sc14g0002500 Simmondsia chinensis
Sed0001597 Sechium edule
SGA_v2.0_scaffold225G43060 Striga asiatica
SMO358G0428 Selaginella moellendorffii
Solyc01g106880.3 Solanum lycopersicum
Sopen01g049160 Solanum pennellii
Sp1g36840 Schrenkiella parvula
SpUn0137_0040 Schrenkiella parvula
TAR376G0809 Trochodendron aralioides
TAR628G1281 Trochodendron aralioides
THA.LOC104809178 Tarenaya hassleriana
THA.LOC104826495 Tarenaya hassleriana
THA.LOC104826496 Tarenaya hassleriana
Thecc.02G119500 Theobroma cacao
Thhalv10011739m.g Eutrema salsugineum
Thhalv10012254m.g Eutrema salsugineum
TPR.G21139 Trifolium pratense
TWI14G1141 Tripterygium wilfordii
unitig_744.g24207 Utricularia gibba
VMungo0720G2114 Vigna mungo

User provided reference genes

Program Settings