Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p43770 Brassica napus
A10p21830 Brassica napus
Aa31LG11G12070 Aethionema arabicum
Aa31LG5G14040 Aethionema arabicum
Actinidia21602 Actinidia chinensis
Ah.09g228030 Amaranthus hybridus
AL3G13220 Arabidopsis lyrata
AL6G28670 Arabidopsis lyrata
Aqoxy7G00918 Aquilegia oxysepala
AT3G03510 Arabidopsis thaliana
AT5G17580 Arabidopsis thaliana
ATR0584G226 Amborella trichopoda
AUR62026555 Chenopodium quinoa
AUR62029029 Chenopodium quinoa
AUR62033925 Chenopodium quinoa
AUR62039429 Chenopodium quinoa
BcaB08g36760 Brassica carinata
BcaC04g18777 Brassica carinata
BcaC05g29860 Brassica carinata
BolC5t34997H Brassica oleracea
BraA05t23115Z Brassica rapa
BraA10t44243Z Brassica rapa
C05p63350 Brassica napus
CAN.G700.30 Capsicum annuum
CANSAT35G1502 Cannabis sativa
CARHR077520 Cardamine hirsuta
CARHR195600 Cardamine hirsuta
Carub.0003s0265 Capsella rubella
Carub.0006s1582 Capsella rubella
Cc05_g03110 Coffea canephora
CDE05G0879 Ceratophyllum demersum
Cfa002270 Carpinus fangiana
Ciclev10033437m.g Citrus clementina
CiPaw.02G046600 Carya illinoinensis
COL.COLO4_37415 Corchorus olitorius
Cpa.g.sc73.87 Carica papaya
CsaV3_3G010600 Cucumis sativus L.
DCAR_029562 Daucus carota
Dinv09471 Davidia involucrata
Dinv09472 Davidia involucrata
Dinv43533 Davidia involucrata
Dinv43979 Davidia involucrata
Duzib128G1826 Durio zibethinus
ECA247G0001 Erigeron canadensis
ECA247G2732 Erigeron canadensis
ECA248G3948 Erigeron canadensis
EL10Ac6g13747 Beta vulgaris
Eucgr.D00979 Eucalyptus grandis
FAN01G2301 Fragaria x ananassa
FAN03G0313 Fragaria x ananassa
FAN06G2351 Fragaria x ananassa
FAN10G0838 Fragaria x ananassa
FvH4_7g07100 Fragaria vesca
Gohir.A07G155000 Gossypium hirsutum
Gohir.D07G161300 Gossypium hirsutum
Gorai.001G184500 Gossypium raimondii
Gorai.013G111300 Gossypium raimondii
GSVIVG01027413001 Vitis vinifera
HanXRQChr01g0020501 Helianthus annuus
HanXRQChr08g0228451 Helianthus annuus
Haze_15814 Corylus avellana
Hma1.2p1_1582F.1_g291970 Hydrangea macrophylla
Lj9A615T54 Lonicera japonica
Lj9P612T38 Lonicera japonica
Lsat_1_v5_gn_1_85420 Lactuca sativa
Manes.08G158100 Manihot esculenta
MBI16_g07681_MAGBIO Magnolia biondii
MD02G1239800 Malus domestica
MD02G1239900 Malus domestica
MD07G1076800 Malus domestica
MELO3C006281.2 Cucumis melo
Migut.B01444 Erythranthe guttata
Migut.I00454 Erythranthe guttata
Nitab4.5_0004594g0110 Nicotiana tabacum
Nitab4.5_0004800g0010 Nicotiana tabacum
Nn1g06024 Nelumbo nucifera
Oeu024953.1 Olea europaea
Oeu032770.1 Olea europaea
Peaxi162Scf00592g00042 Petunia axillaris
PGSC0003DMG400001806 Solanum tuberosum
PGSC0003DMG400027005 Solanum tuberosum
Potri.013G073700 Populus trichocarpa
Prupe.2G097900 Prunus persica
PSO063G4333 Papaver somniferum
PSO349G0267 Papaver somniferum
PSO765G0128 Papaver somniferum
PSO782G5096 Papaver somniferum
QL02p002301 Quercus lobata
RcHm_v2.0_Chr1g0337041 Rosa chinensis
Rhsim04G0139000 Rhododendron simsii
Rhsim12G0078200 Rhododendron simsii
Sabra06G0160800 Salix brachista
Sabra13G0063900 Salix brachista
SalBow1G3738 Salvia bowleyana
SalBow1G6348 Salvia bowleyana
SalBow1G7778 Salvia bowleyana
SalBow5G4010 Salvia bowleyana
Sc11g0001430 Simmondsia chinensis
Sed0027307 Sechium edule
SGA_v2.0_scaffold5G03085 Striga asiatica
SHI39093 Sapria himalayana
Solyc01g081140.1 Solanum lycopersicum
Solyc06g073480.3 Solanum lycopersicum
Sopen01g032750 Solanum pennellii
Sopen06g029840 Solanum pennellii
Sp3g02500 Schrenkiella parvula
Sp6g26640 Schrenkiella parvula
TAR626G1467 Trochodendron aralioides
THA.LOC104802899 Tarenaya hassleriana
THA.LOC104827468 Tarenaya hassleriana
Thecc.05G230100 Theobroma cacao
Thhalv10015963m.g Eutrema salsugineum
Thhalv10022312m.g Eutrema salsugineum
TWI32G0951 Tripterygium wilfordii
TWI60G1108 Tripterygium wilfordii

User provided reference genes

Program Settings