Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p34890 Brassica napus
Aa31LG5G17380 Aethionema arabicum
Actinidia18632 Actinidia chinensis
Actinidia40300 Actinidia chinensis
AL3G17920 Arabidopsis lyrata
Aqoxy2G02877 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3X21TC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AS7UNS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZE0ACQ Arachis hypogaea
AT3G06790 Arabidopsis thaliana
ATR0561G134 Amborella trichopoda
Atru.chr2.2125 Acer truncatum
Atru.chr4.2913 Acer truncatum
AUR62015252 Chenopodium quinoa
AUR62018054 Chenopodium quinoa
BcaC05g30557 Brassica carinata
BcaC09g47920 Brassica carinata
BNapus_Darmor_BZH_scaffold_117p00090 Brassica napus
BolC1t05586H Brassica oleracea
BolC3t16517H Brassica oleracea
BraA01t04414Z Brassica rapa
BraA03t12669Z Brassica rapa
C03p42460 Brassica napus
CAN.G14.30 Capsicum annuum
CANSAT11G2176 Cannabis sativa
CARHR081410 Cardamine hirsuta
Carub.0003s0634 Capsella rubella
Ca_21477_v3 Cicer arietinum L.
Cc03_g01480 Coffea canephora
CDE05G2972 Ceratophyllum demersum
CDE11G1024 Ceratophyllum demersum
Cfa015432 Carpinus fangiana
Ciclev10005719m.g Citrus clementina
CiPaw.02G079400 Carya illinoinensis
ClCG06G004940 Citrullus lanatus
COL.COLO4_13809 Corchorus olitorius
Cpa.g.sc50.153 Carica papaya
CsaV3_6G023800 Cucumis sativus L.
CsaV3_6G023810 Cucumis sativus L.
CSS0006358 Camellia sinensis var. sinensis
Dinv44346 Davidia involucrata
Duzib151G0187 Durio zibethinus
ECA240G1774 Erigeron canadensis
EL10Ac2g04820 Beta vulgaris
Eucgr.B01560 Eucalyptus grandis
FAN12G1774 Fragaria x ananassa
FAN12G4143 Fragaria x ananassa
FvH4_4g18760 Fragaria vesca
Glyma.07G245000 Glycine max
Glyma.17G028800 Glycine max
Gohir.A09G236600 Gossypium hirsutum
Gohir.A13G212600 Gossypium hirsutum
Gohir.A13G212800 Gossypium hirsutum
Gohir.D09G237400 Gossypium hirsutum
Gohir.D13G213800 Gossypium hirsutum
Gohir.D13G213900 Gossypium hirsutum
Gorai.006G260400 Gossypium raimondii
GSVIVG01035101001 Vitis vinifera
HanXRQChr13g0413991 Helianthus annuus
Haze_01152 Corylus avellana
HPP92_013729 Vanilla planifolia
Hund20515 Selenicereus undatus
Lalb_Chr07g0182281 Lupinus albus
Lj4g0024918 Lotus japonicus
Lj6A682G73 Lonicera japonica
Lsat_1_v5_gn_6_78141 Lactuca sativa
Manes.15G010200 Manihot esculenta
MBI19_g30014_MAGBIO Magnolia biondii
MD16G1163100 Malus domestica
Medtr4g120340 Medicago truncatula
MELO3C021307.2 Cucumis melo
MELO3C021308.2 Cucumis melo
Migut.N00071 Erythranthe guttata
Nitab4.5_0002215g0030 Nicotiana tabacum
Nitab4.5_0012392g0030 Nicotiana tabacum
Nn3g19119 Nelumbo nucifera
Nn3g21557 Nelumbo nucifera
Nn4g25747 Nelumbo nucifera
Oeu016256.1 Olea europaea
Oeu031986.1 Olea europaea
Os03g0581600 Oryza sativa ssp. japonica
Peaxi162Scf00065g01123 Petunia axillaris
PGR031G0895 Punica granatum
PGSC0003DMG400016815 Solanum tuberosum
Phvul.003G107700 Phaseolus vulgaris
Potri.010G007200 Populus trichocarpa
Prupe.1G130500 Prunus persica
PSO832G2484 Papaver somniferum
QL06p010755 Quercus lobata
RcHm_v2.0_Chr4g0423551 Rosa chinensis
Rhsim13G0098300 Rhododendron simsii
Sabra10G0005800 Salix brachista
SalBow5G4105 Salvia bowleyana
Sc13g0003170 Simmondsia chinensis
Sed0002855 Sechium edule
SEGI_08260 Sequoiadendron giganteum
SEGI_21170 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22450 Striga asiatica
SGA_v2.0_scaffold91G28031 Striga asiatica
Solyc01g066060.4 Solanum lycopersicum
Sopen01g027610 Solanum pennellii
Sp3g05770 Schrenkiella parvula
TAR362G0610 Trochodendron aralioides
TAR633G2576 Trochodendron aralioides
THA.LOC104818904 Tarenaya hassleriana
Thecc.04G290000 Theobroma cacao
Thhalv10021360m.g Eutrema salsugineum
TPR.G22769 Trifolium pratense
TWI53G0218 Tripterygium wilfordii
TWI73G0767 Tripterygium wilfordii
unitig_26.g10571 Utricularia gibba
vmacro08188 Vaccinium macrocarpon
vmacro23237 Vaccinium macrocarpon
VMungo1215G1916 Vigna mungo
Zm00001eb431000 Zea mays

User provided reference genes

Program Settings