Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p31400 Brassica napus
Aa31LG5G1440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis
AL6G51370 Arabidopsis lyrata
Aqoxy5G02741 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea
AT4G01900 Arabidopsis thaliana
ATR0693G068 Amborella trichopoda
Atru.chr5.924 Acer truncatum
AUR62024592 Chenopodium quinoa
BcaB01g02393 Brassica carinata
BcaB01g02398 Brassica carinata
BcaC01g06792 Brassica carinata
BolC3t16112H Brassica oleracea
BolC9t53077H Brassica oleracea
BraA03t12321Z Brassica rapa
C03p38310 Brassica napus
C09p01450 Brassica napus
CAN.G1280.40 Capsicum annuum
CARHR249910 Cardamine hirsuta
Carub.0006s3531 Capsella rubella
Ca_09230_v3 Cicer arietinum L.
Cc01_g21970 Coffea canephora
CDE11G0810 Ceratophyllum demersum
Cfa004859 Carpinus fangiana
Ciclev10022378m.g Citrus clementina
CiPaw.07G121500 Carya illinoinensis
CiPaw.08G086000 Carya illinoinensis
ClCG09G004810 Citrullus lanatus
COL.COLO4_23180 Corchorus olitorius
Cpa.g.c29544.2 Carica papaya
Cre07.g357350 Chlamydomonas reinhardtii
CsaV3_7G030270 Cucumis sativus L.
CSS0007691 Camellia sinensis var. sinensis
CSS0013168 Camellia sinensis var. sinensis
DCAR_002917 Daucus carota
Dinv12109 Davidia involucrata
Dinv33147 Davidia involucrata
Duzib138G1774 Durio zibethinus
Duzib211G0548 Durio zibethinus
Eucgr.H00899 Eucalyptus grandis
Eucgr.L01805 Eucalyptus grandis
FAN19G0677 Fragaria x ananassa
FAN26G0114 Fragaria x ananassa
FAN28G1862 Fragaria x ananassa
FvH4_1g26590 Fragaria vesca
Glyma.03G222100 Glycine max
Glyma.19G219300 Glycine max
GSVIVG01010608001 Vitis vinifera
GSVIVG01028181001 Vitis vinifera
GSVIVG01037028001 Vitis vinifera
Haze_05096 Corylus avellana
Haze_27360 Corylus avellana
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla
HPP92_002654 Vanilla planifolia
HPP92_027922 Vanilla planifolia
HPP92_027923 Vanilla planifolia
Hund09668 Selenicereus undatus
Lalb_Chr04g0260061 Lupinus albus
Lj1C13T3 Lonicera japonica
Lj1g0024926 Lotus japonicus
Manes.01G231800 Manihot esculenta
Mapoly0061s0127 Marchantia polymorpha
MBI18_g09652_MAGBIO Magnolia biondii
MBI18_g11536_MAGBIO Magnolia biondii
MCO04G045 Micromonas commoda
MD09G1287900 Malus domestica
MD17G1280100 Malus domestica
Medtr7g109970 Medicago truncatula
MELO3C023629.2 Cucumis melo
Migut.D00043 Erythranthe guttata
MSTRG.21716 Avicennia marina
Nitab4.5_0000222g0190 Nicotiana tabacum
Nitab4.5_0000363g0020 Nicotiana tabacum
Nitab4.5_0001013g0020 Nicotiana tabacum
Nitab4.5_0003324g0110 Nicotiana tabacum
Nn3g21840 Nelumbo nucifera
Oeu038057.1 Olea europaea
Os05g0133100 Oryza sativa ssp. japonica
Peaxi162Scf00058g00218 Petunia axillaris
PGR083G1650 Punica granatum
PGSC0003DMG400007277 Solanum tuberosum
Phvul.001G215500 Phaseolus vulgaris
Potri.002G191300 Populus trichocarpa
Pp3c4_15530 Physcomitrium patens
Prupe.3G005300 Prunus persica
Psat3g018680 Pisum sativum
PSO170G2504 Papaver somniferum
PSO724G1078 Papaver somniferum
QL12p018506 Quercus lobata
RcHm_v2.0_Chr3g0486731 Rosa chinensis
Rhsim01G0292800 Rhododendron simsii
Sabra02G0164300 Salix brachista
SalBow3G0392 Salvia bowleyana
Sc05g0000220 Simmondsia chinensis
Sed0005932 Sechium edule
Sed0008492 Sechium edule
SEGI_19322 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25710 Striga asiatica
SMO364G0946 Selaginella moellendorffii
Solyc01g015000.3 Solanum lycopersicum
Solyc06g009400.3 Solanum lycopersicum
Sopen06g004130 Solanum pennellii
Sp6g01770 Schrenkiella parvula
TAR362G1022 Trochodendron aralioides
THA.LOC104801315 Tarenaya hassleriana
Thecc.01G320200 Theobroma cacao
Thhalv10028983m.g Eutrema salsugineum
TPR.G4038 Trifolium pratense
TWI59G1195 Tripterygium wilfordii
unitig_578.g16634 Utricularia gibba
vmacro15097 Vaccinium macrocarpon
VMungo1383G0882 Vigna mungo

User provided reference genes

Program Settings