Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35700 Brassica napus
A05p38990 Brassica napus
Aa31LG3G2590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.219 Anthoceros agrestis
Actinidia28942 Actinidia chinensis
Ah.15g091350 Amaranthus hybridus
AL3G21390 Arabidopsis lyrata
AL4G26130 Arabidopsis lyrata
Aqoxy2G01547 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BLF45B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V2ZWQA Arachis hypogaea
AT3G10060 Arabidopsis thaliana
ATR0665G470 Amborella trichopoda
Atru.chr8.1674 Acer truncatum
AUR62040187 Chenopodium quinoa
AUR62042695 Chenopodium quinoa
BcaB03g11574 Brassica carinata
BolC3t16608H Brassica oleracea
BolC5t34458H Brassica oleracea
BraA05t22690Z Brassica rapa
C03p43370 Brassica napus
C05p58020 Brassica napus
CAN.G1830.11 Capsicum annuum
CANSAT25G3870 Cannabis sativa
CARHR084560 Cardamine hirsuta
Carub.0003s0916 Capsella rubella
Ca_11543_v3 Cicer arietinum L.
Ca_11565_v3 Cicer arietinum L.
Ca_11566_v3 Cicer arietinum L.
CBR_g30794 Chara braunii
Cc06_g04850 Coffea canephora
CDE02G3585 Ceratophyllum demersum
CDE09G0920 Ceratophyllum demersum
Cfa016496 Carpinus fangiana
Ciclev10012638m.g Citrus clementina
CiPaw.09G005800 Carya illinoinensis
COL.COLO4_22265 Corchorus olitorius
Cpa.g.sc5.118 Carica papaya
Cre17.g733250 Chlamydomonas reinhardtii
CsaV3_3G036610 Cucumis sativus L.
CSS0006417 Camellia sinensis var. sinensis
CSS0034418 Camellia sinensis var. sinensis
DCAR_017644 Daucus carota
Dinv35841 Davidia involucrata
Duzib106G0620 Durio zibethinus
ECA238G1996 Erigeron canadensis
EL10Ac7g16723 Beta vulgaris
Eucgr.K02414 Eucalyptus grandis
FvH4_6g17331 Fragaria vesca
Glyma.10G063800 Glycine max
Glyma.13G148400 Glycine max
Gohir.A01G211700 Gossypium hirsutum
Gohir.D01G200500 Gossypium hirsutum
Gorai.002G245200 Gossypium raimondii
GSVIVG01033728001 Vitis vinifera
HanXRQChr01g0016601 Helianthus annuus
Hma1.2p1_0669F.1_g200220 Hydrangea macrophylla
Hma1.2p1_1578F.1_g291810 Hydrangea macrophylla
Hma1.2p1_1578F.1_g291820 Hydrangea macrophylla
Hma1.2p1_1578F.1_g291830 Hydrangea macrophylla
HPP92_027841 Vanilla planifolia
Hund04101 Selenicereus undatus
Lalb_Chr21g0315301 Lupinus albus
Lj3A1008G65 Lonicera japonica
Lj5g0004178 Lotus japonicus
Lsat_1_v5_gn_2_24101 Lactuca sativa
Manes.09G047800 Manihot esculenta
Mapoly0135s0005 Marchantia polymorpha
MCO05G151 Micromonas commoda
MD12G1101900 Malus domestica
Medtr1g061850 Medicago truncatula
MELO3C009415.2 Cucumis melo
Migut.J00481 Erythranthe guttata
MSTRG.5790 Avicennia marina
Nitab4.5_0004281g0100 Nicotiana tabacum
Nitab4.5_0006709g0020 Nicotiana tabacum
Nn2g13922 Nelumbo nucifera
Oeu031869.1 Olea europaea
Peaxi162Scf01063g00114 Petunia axillaris
PGR142G0224 Punica granatum
Phvul.007G225600 Phaseolus vulgaris
Potri.016G096600 Populus trichocarpa
Pp3c17_4710 Physcomitrium patens
PRCOL_00000638 Prasinoderma coloniale
Psat6g078120 Pisum sativum
PSO339G2214 Papaver somniferum
PSO801G0321 Papaver somniferum
QL07p041198 Quercus lobata
QL07p041202 Quercus lobata
RcHm_v2.0_Chr1g0340031 Rosa chinensis
RcHm_v2.0_Chr3g0471471 Rosa chinensis
Rhsim03G0085600 Rhododendron simsii
Sabra16G0099800 Salix brachista
Sabra16G0099900 Salix brachista
SalBow3G4002 Salvia bowleyana
Sc07g0004660 Simmondsia chinensis
Sed0004809 Sechium edule
SEGI_08504 Sequoiadendron giganteum
SEGI_09560 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24814 Striga asiatica
SMO367G0543 Selaginella moellendorffii
Solyc09g008650.3 Solanum lycopersicum
Sopen09g003450 Solanum pennellii
Sp3g08370 Schrenkiella parvula
TAR636G1968 Trochodendron aralioides
THA.LOC104826941 Tarenaya hassleriana
Thecc.05G076600 Theobroma cacao
Thhalv10021451m.g Eutrema salsugineum
TPR.G27078 Trifolium pratense
TWI77G0546 Tripterygium wilfordii
unitig_8.g4124 Utricularia gibba
vmacro07354 Vaccinium macrocarpon
vmacro15052 Vaccinium macrocarpon
VMungo0720G1353 Vigna mungo
Zm00001eb302310 Zea mays

User provided reference genes

Program Settings