Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p69060 Brassica napus
AL1G11170 Arabidopsis lyrata
Aqoxy3G01066 Aquilegia oxysepala
Aqoxy6G00316 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea
AT1G01290 Arabidopsis thaliana
ATR0602G026 Amborella trichopoda
Atru.chr5.678 Acer truncatum
AUR62004502 Chenopodium quinoa
AUR62014969 Chenopodium quinoa
BolC8t52877H Brassica oleracea
BraA09t42243Z Brassica rapa
C08p53630 Brassica napus
CAN.G1178.29 Capsicum annuum
CAN.G1385.4 Capsicum annuum
CANSAT56G1276 Cannabis sativa
CARHR001180 Cardamine hirsuta
Carub.0001s0093 Capsella rubella
Ca_11259_v3 Cicer arietinum L.
CBR_g23014 Chara braunii
Cc01_g12480 Coffea canephora
CDE10G0236 Ceratophyllum demersum
Cfa022703 Carpinus fangiana
Ciclev10022060m.g Citrus clementina
CiPaw.01G076800 Carya illinoinensis
ClCG09G009460 Citrullus lanatus
COL.COLO4_21448 Corchorus olitorius
Cpa.g.sc46.111 Carica papaya
Cpa.g.sc96.27 Carica papaya
Cre08.g361050 Chlamydomonas reinhardtii
CsaV3_7G025390 Cucumis sativus L.
CSS0028122 Camellia sinensis var. sinensis
CSS0036785 Camellia sinensis var. sinensis
DCAR_021504 Daucus carota
Dinv22299 Davidia involucrata
ECA236G0577 Erigeron canadensis
EL10Ac1g00259 Beta vulgaris
Eucgr.E00049 Eucalyptus grandis
FAN01G3090 Fragaria x ananassa
FAN03G0019 Fragaria x ananassa
FAN06G2002 Fragaria x ananassa
FAN06G3195 Fragaria x ananassa
FAN10G0984 Fragaria x ananassa
FAN10G4095 Fragaria x ananassa
FvH4_7g16680 Fragaria vesca
Glyma.20G102700 Glycine max
Gohir.A11G097200 Gossypium hirsutum
Gohir.D01G074900 Gossypium hirsutum
Gohir.D05G312133 Gossypium hirsutum
Gohir.D08G121100 Gossypium hirsutum
Gohir.D10G162832 Gossypium hirsutum
Gohir.D11G102000 Gossypium hirsutum
Gorai.007G109000 Gossypium raimondii
Gorai.011G078500 Gossypium raimondii
GSVIVG01027159001 Vitis vinifera
HanXRQChr06g0170731 Helianthus annuus
Haze_27006 Corylus avellana
HPP92_002925 Vanilla planifolia
HPP92_028636 Vanilla planifolia
Hund16718 Selenicereus undatus
Lalb_Chr06g0163941 Lupinus albus
Lj5g0001318 Lotus japonicus
Lsat_1_v5_gn_8_13101 Lactuca sativa
Manes.05G022300 Manihot esculenta
Mapoly0053s0024 Marchantia polymorpha
MBI06_g44795_MAGBIO Magnolia biondii
MCO01G113 Micromonas commoda
MD07G1150800 Malus domestica
Medtr1g114590 Medicago truncatula
Medtr5g015730 Medicago truncatula
Medtr5g015740 Medicago truncatula
MELO3C024139.2 Cucumis melo
Migut.B01880 Erythranthe guttata
MSTRG.17349 Avicennia marina
Nitab4.5_0000258g0220 Nicotiana tabacum
Nitab4.5_0004506g0020 Nicotiana tabacum
Nn8g41032 Nelumbo nucifera
Oeu007886.1 Olea europaea
Oeu014974.1 Olea europaea
Os03g0801300 Oryza sativa ssp. japonica
Os04g0460500 Oryza sativa ssp. japonica
Peaxi162Scf00716g00022 Petunia axillaris
PGR142G3971 Punica granatum
PGSC0003DMG400007011 Solanum tuberosum
Phvul.007G014400 Phaseolus vulgaris
Potri.014G099500 Populus trichocarpa
Pp3c20_11370 Physcomitrium patens
PRCOL_00000953 Prasinoderma coloniale
Prupe.2G189500 Prunus persica
Psat6g234040 Pisum sativum
PSO063G6262 Papaver somniferum
PSO170G4910 Papaver somniferum
QL04p060559 Quercus lobata
RcHm_v2.0_Chr1g0359831 Rosa chinensis
Rhsim01G0172900 Rhododendron simsii
Rhsim04G0222700 Rhododendron simsii
Sabra14G0073000 Salix brachista
SalBow3G0783 Salvia bowleyana
Sed0021558 Sechium edule
SGA_v2.0_scaffold22G09984 Striga asiatica
SMO351G0341 Selaginella moellendorffii
Solyc05g050570.3 Solanum lycopersicum
Sopen05g029010 Solanum pennellii
Sp1g01000 Schrenkiella parvula
TAR629G1073 Trochodendron aralioides
TAR636G2744 Trochodendron aralioides
Thecc.01G341400 Theobroma cacao
Thhalv10008544m.g Eutrema salsugineum
TPR.G4075 Trifolium pratense
TWI14G0597 Tripterygium wilfordii
unitig_899.g14796 Utricularia gibba
vmacro12673 Vaccinium macrocarpon
VMungo0720G2201 Vigna mungo
VMungo0964G0001 Vigna mungo
Zm00001eb080710 Zea mays

User provided reference genes

Program Settings