Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3731 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis
Actinidia19898 Actinidia chinensis
Actinidia24040 Actinidia chinensis
Actinidia31921 Actinidia chinensis
Actinidia31922 Actinidia chinensis
Aqoxy3G00572 Aquilegia oxysepala
Aqoxy3G03766 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JA47JZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea
ATR0691G163 Amborella trichopoda
ATR0691G250 Amborella trichopoda
Atru.chr11.1527 Acer truncatum
CAN.G869.31 Capsicum annuum
CAN.G992.5 Capsicum annuum
CANSAT64G2316 Cannabis sativa
Ca_05192_v3 Cicer arietinum L.
Ca_22680_v3 Cicer arietinum L.
Cc11_g11380 Coffea canephora
Cfa008830 Carpinus fangiana
Ciclev10031661m.g Citrus clementina
CiPaw.06G095800 Carya illinoinensis
ClCG05G023430 Citrullus lanatus
COL.COLO4_27774 Corchorus olitorius
Cpa.g.c44692 Carica papaya
Cre06.g263550 Chlamydomonas reinhardtii
CsaV3_5G033580 Cucumis sativus L.
CSS0010285 Camellia sinensis var. sinensis
CSS0029748 Camellia sinensis var. sinensis
CSS0031083 Camellia sinensis var. sinensis
DCAR_023729 Daucus carota
Dinv33999 Davidia involucrata
Duzib268G0361 Durio zibethinus
ECA233G1196 Erigeron canadensis
Eucgr.G02408 Eucalyptus grandis
FAN12G2539 Fragaria x ananassa
FAN17G2474 Fragaria x ananassa
FAN22G0943 Fragaria x ananassa
FvH4_4g28930 Fragaria vesca
Glyma.02G124600 Glycine max
Gohir.A03G107200 Gossypium hirsutum
Gohir.D02G132300 Gossypium hirsutum
Gorai.005G148200 Gossypium raimondii
GSVIVG01010124001 Vitis vinifera
HanXRQChr08g0215061 Helianthus annuus
Haze_11844 Corylus avellana
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla
HPP92_020469 Vanilla planifolia
HPP92_020537 Vanilla planifolia
HPP92_026164 Vanilla planifolia
Lj2g0006896 Lotus japonicus
Lj3C1026T6 Lonicera japonica
Lj6C772T8 Lonicera japonica
LjContig00408g0014580 Lotus japonicus
Lsat_1_v5_gn_8_36700 Lactuca sativa
Manes.14G092000 Manihot esculenta
Mapoly0024s0128 Marchantia polymorpha
MBI14_g08222_MAGBIO Magnolia biondii
MCO10G065 Micromonas commoda
MD13G1054900 Malus domestica
MD16G1053800 Malus domestica
Medtr0328s0040 Medicago truncatula
Medtr8g065720 Medicago truncatula
Medtr8g069545 Medicago truncatula
MELO3C012175.2 Cucumis melo
Migut.L01151 Erythranthe guttata
Migut.N00803 Erythranthe guttata
MSTRG.7721 Avicennia marina
Nitab4.5_0000259g0050 Nicotiana tabacum
Nitab4.5_0002309g0040 Nicotiana tabacum
Nn4g23574 Nelumbo nucifera
Nn4g23575 Nelumbo nucifera
Oeu001640.1 Olea europaea
Oeu021813.1 Olea europaea
Peaxi162Scf00188g00923 Petunia axillaris
PGR119G0337 Punica granatum
PGSC0003DMG400001803 Solanum tuberosum
PGSC0003DMG400019650 Solanum tuberosum
Potri.008G113000 Populus trichocarpa
Potri.010G136300 Populus trichocarpa
Pp3c16_11950 Physcomitrium patens
Pp3c27_4530 Physcomitrium patens
Pp3c3_23290 Physcomitrium patens
Pp3c4_7760 Physcomitrium patens
Pp3c5_12950 Physcomitrium patens
Pp3c6_17060 Physcomitrium patens
Psat2g097440 Pisum sativum
Psat2g097480 Pisum sativum
Psat4g123400 Pisum sativum
RcHm_v2.0_Chr4g0437071 Rosa chinensis
Sabra10G0104800 Salix brachista
Sabra10G0104900 Salix brachista
SalBow2G2641 Salvia bowleyana
Sed0007808 Sechium edule
Sed0008138 Sechium edule
SEGI_24845 Sequoiadendron giganteum
SMO143G0192 Selaginella moellendorffii
SMO143G0243 Selaginella moellendorffii
SMO186G0008 Selaginella moellendorffii
SMO198G0052 Selaginella moellendorffii
SMO265G0021 Selaginella moellendorffii
SMO334G0059 Selaginella moellendorffii
Solyc01g081280.3 Solanum lycopersicum
Solyc05g010630.4 Solanum lycopersicum
Solyc05g010640.3 Solanum lycopersicum
Sopen01g032850 Solanum pennellii
Sopen05g006440 Solanum pennellii
TAR374G0132 Trochodendron aralioides
TAR622G1172 Trochodendron aralioides
Thecc.02G320200 Theobroma cacao
TPR.G20006 Trifolium pratense
TPR.G29773 Trifolium pratense
TWI75G1304 Tripterygium wilfordii

User provided reference genes

Program Settings