Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p67500 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis
Actinidia11860 Actinidia chinensis
Ah.09g234750 Amaranthus hybridus
AL2G13680 Arabidopsis lyrata
Aqoxy4G01856 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C0PD3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea
AT1G62250 Arabidopsis thaliana
ATR0794G153 Amborella trichopoda
Atru.chr10.2253 Acer truncatum
AUR62012727 Chenopodium quinoa
AUR62021927 Chenopodium quinoa
BcaC02g10063 Brassica carinata
BcaC02g10501 Brassica carinata
BcaC06g31885 Brassica carinata
BolC4t24361H Brassica oleracea
BolC4t24891H Brassica oleracea
BraA01t02718Z Brassica rapa
C04p28180 Brassica napus
C04p33270 Brassica napus
CAN.G1014.10 Capsicum annuum
CANSAT56G0113 Cannabis sativa
Carub.0002s0276 Capsella rubella
Ca_21073_v3 Cicer arietinum L.
Cc09_g01500 Coffea canephora
CDE05G2181 Ceratophyllum demersum
Cfa000203 Carpinus fangiana
Ciclev10016210m.g Citrus clementina
CiPaw.09G093600 Carya illinoinensis
CiPaw.10G072800 Carya illinoinensis
CiPaw.10G072900 Carya illinoinensis
ClCG01G021850 Citrullus lanatus
COL.COLO4_31796 Corchorus olitorius
Cpa.g.sc1199.4 Carica papaya
Cre02.g141850 Chlamydomonas reinhardtii
CsaV3_6G048910 Cucumis sativus L.
CSS0002589 Camellia sinensis var. sinensis
DCAR_028192 Daucus carota
Dinv13912 Davidia involucrata
Dinv20064 Davidia involucrata
Duzib160G0853 Durio zibethinus
Duzib192G0359 Durio zibethinus
ECA234G3681 Erigeron canadensis
EL10Ac8g20084 Beta vulgaris
Eucgr.E03906 Eucalyptus grandis
Eucgr.L02772 Eucalyptus grandis
FAN11G3374 Fragaria x ananassa
FAN16G3059 Fragaria x ananassa
FAN21G2957 Fragaria x ananassa
FAN25G2833 Fragaria x ananassa
FvH4_3g43300 Fragaria vesca
Glyma.07G262000 Glycine max
Glyma.17G012100 Glycine max
Gohir.A06G149100 Gossypium hirsutum
Gohir.D06G155200 Gossypium hirsutum
Gorai.010G181400 Gossypium raimondii
GSVIVG01012704001 Vitis vinifera
HanXRQChr16g0515501 Helianthus annuus
Haze_06820 Corylus avellana
Hund21421 Selenicereus undatus
Lalb_Chr07g0177131 Lupinus albus
Lj1A1232T100 Lonicera japonica
Lj4g0000977 Lotus japonicus
Lsat_1_v5_gn_4_59280 Lactuca sativa
Manes.17G025800 Manihot esculenta
Mapoly0071s0090 Marchantia polymorpha
MBI18_g04903_MAGBIO Magnolia biondii
MD11G1027900 Malus domestica
Medtr4g132350 Medicago truncatula
MELO3C007402.2 Cucumis melo
Migut.M01335 Erythranthe guttata
MSTRG.7198 Avicennia marina
Nitab4.5_0002695g0060 Nicotiana tabacum
Nitab4.5_0007963g0030 Nicotiana tabacum
Nn1g07184 Nelumbo nucifera
Nn1g08227 Nelumbo nucifera
Oeu051204.1 Olea europaea
Os03g0744700 Oryza sativa ssp. japonica
Peaxi162Scf00178g01715 Petunia axillaris
PGR042G2408 Punica granatum
PGSC0003DMG400016446 Solanum tuberosum
Phvul.003G080300 Phaseolus vulgaris
Potri.011G006700 Populus trichocarpa
Pp3c10_11430 Physcomitrium patens
PRCOL_00005158 Prasinoderma coloniale
Prupe.6G022000 Prunus persica
Psat4g006040 Pisum sativum
PSO832G3220 Papaver somniferum
QL02p099916 Quercus lobata
QL05p072698 Quercus lobata
RcHm_v2.0_Chr5g0077361 Rosa chinensis
Rhsim02G0105900 Rhododendron simsii
Sabra04G0005100 Salix brachista
SalBow8G2851 Salvia bowleyana
Sc05g0009300 Simmondsia chinensis
Sed0022215 Sechium edule
SEGI_02842 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01906 Striga asiatica
SMO347G0662 Selaginella moellendorffii
Solyc02g080780.3 Solanum lycopersicum
Sopen02g025470 Solanum pennellii
Sp2g02390 Schrenkiella parvula
TAR627G0415 Trochodendron aralioides
TAR629G0592 Trochodendron aralioides
THA.LOC104818712 Tarenaya hassleriana
Thecc.06G223400 Theobroma cacao
Thhalv10023639m.g Eutrema salsugineum
TPR.G29296 Trifolium pratense
TWI38G1647 Tripterygium wilfordii
unitig_748.g7953 Utricularia gibba
vmacro15796 Vaccinium macrocarpon
VMungo1215G0309 Vigna mungo
Zm00001eb056950 Zea mays

User provided reference genes

Program Settings