Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p35030 Brassica napus
A05p00290 Brassica napus
A09p54670 Brassica napus
Aa31LG10G16560 Aethionema arabicum
Aa31LG1G29000 Aethionema arabicum
Actinidia24354 Actinidia chinensis
Actinidia38740 Actinidia chinensis
Ah.15g093200 Amaranthus hybridus
AL4G47240 Arabidopsis lyrata
AL5G45600 Arabidopsis lyrata
Aqoxy5G03904 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8CC3D4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DC259S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZQY06 Arachis hypogaea
AT2G47670 Arabidopsis thaliana
AT3G62820 Arabidopsis thaliana
ATR0807G193 Amborella trichopoda
Atru.chr5.1149 Acer truncatum
BcaB02g08755 Brassica carinata
BcaB06g29491 Brassica carinata
BcaC02g06986 Brassica carinata
BcaC02g12551 Brassica carinata
BcaC07g40759 Brassica carinata
BcaC07g42734 Brassica carinata
BcaC07g42735 Brassica carinata
BolC4t21667H Brassica oleracea
BolC4t28774H Brassica oleracea
BolC8t51337H Brassica oleracea
BraA04t18938Z Brassica rapa
BraA05t19026Z Brassica rapa
BraA09t40878Z Brassica rapa
C04p00200 Brassica napus
C04p72920 Brassica napus
C08p37570 Brassica napus
CAN.G906.9 Capsicum annuum
CANSAT25G0521 Cannabis sativa
CARHR143060 Cardamine hirsuta
CARHR173090 Cardamine hirsuta
Carub.0004s3039 Capsella rubella
Carub.0005s2948 Capsella rubella
Ca_09175_v3 Cicer arietinum L.
Ca_10337_v3 Cicer arietinum L.
Cfa005914 Carpinus fangiana
Ciclev10022355m.g Citrus clementina
CiPaw.07G108800 Carya illinoinensis
ClCG09G005870 Citrullus lanatus
COL.COLO4_23347 Corchorus olitorius
Cpa.g.sc9.263 Carica papaya
CsaV3_4G032130 Cucumis sativus L.
CsaV3_7G029270 Cucumis sativus L.
Dinv19694 Davidia involucrata
Duzib138G0565 Durio zibethinus
Duzib211G0417 Durio zibethinus
ECA247G3458 Erigeron canadensis
Eucgr.H01114 Eucalyptus grandis
FAN15G0119 Fragaria x ananassa
FAN20G1536 Fragaria x ananassa
FAN24G2977 Fragaria x ananassa
FAN27G1999 Fragaria x ananassa
FvH4_2g25710 Fragaria vesca
Glyma.03G214600 Glycine max
Gohir.A12G130500 Gossypium hirsutum
Gohir.D12G134300 Gossypium hirsutum
Gorai.008G145300 Gossypium raimondii
HanXRQChr10g0284661 Helianthus annuus
Haze_04936 Corylus avellana
Hma1.2p1_1471F.1_g285670 Hydrangea macrophylla
HPP92_006920 Vanilla planifolia
Lalb_Chr06g0163521 Lupinus albus
Lalb_Chr18g0047001 Lupinus albus
Lj1g0006608 Lotus japonicus
Lj2P1194T36 Lonicera japonica
Lsat_1_v5_gn_9_5640 Lactuca sativa
Manes.05G062200 Manihot esculenta
MBI18_g06879_MAGBIO Magnolia biondii
MBI18_g42651_MAGBIO Magnolia biondii
MD03G1288100 Malus domestica
MD11G1310200 Malus domestica
Medtr1g088540 Medicago truncatula
Medtr7g108790 Medicago truncatula
MELO3C016001.2 Cucumis melo
Migut.D00218 Erythranthe guttata
MSTRG.21633 Avicennia marina
Nitab4.5_0000264g0090 Nicotiana tabacum
Nitab4.5_0001362g0070 Nicotiana tabacum
Nn3g21487 Nelumbo nucifera
PGR119G1707 Punica granatum
PGSC0003DMG400026302 Solanum tuberosum
Phvul.001G207300 Phaseolus vulgaris
Potri.014G129400 Populus trichocarpa
Prupe.8G261300 Prunus persica
Psat3g022080 Pisum sativum
Psat6g166400 Pisum sativum
PSO170G1831 Papaver somniferum
PSO170G4983 Papaver somniferum
PSO407G0042 Papaver somniferum
QL12p028501 Quercus lobata
RcHm_v2.0_Chr6g0293991 Rosa chinensis
Rhsim13G0010300 Rhododendron simsii
SalBow3G4037 Salvia bowleyana
Sed0025021 Sechium edule
SGA_v2.0_scaffold2G01393 Striga asiatica
Solyc08g006690.1 Solanum lycopersicum
Sp4g29600 Schrenkiella parvula
Sp5g00690 Schrenkiella parvula
TAR362G0121 Trochodendron aralioides
THA.LOC104798834 Tarenaya hassleriana
THA.LOC104800001 Tarenaya hassleriana
THA.LOC104817496 Tarenaya hassleriana
Thecc.01G300200 Theobroma cacao
Thhalv10001636m.g Eutrema salsugineum
Thhalv10006253m.g Eutrema salsugineum
TPR.G17968 Trifolium pratense
TPR.G9627 Trifolium pratense
TWI23G0113 Tripterygium wilfordii
VMungo1383G1313 Vigna mungo

User provided reference genes

Program Settings