Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01710 Brassica napus
Aa31LG10G14420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis
Actinidia18349 Actinidia chinensis
Actinidia32506 Actinidia chinensis
Ah.05g177890 Amaranthus hybridus
AL5G42520 Arabidopsis lyrata
Aqoxy1G01627 Aquilegia oxysepala
Aqoxy5G04137 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea
AT3G60300 Arabidopsis thaliana
ATR0057G021 Amborella trichopoda
Atru.chr5.122 Acer truncatum
AUR62013748 Chenopodium quinoa
AUR62023403 Chenopodium quinoa
AUR62044571 Chenopodium quinoa
BolC4t24784H Brassica oleracea
BraA04t15895Z Brassica rapa
C04p32350 Brassica napus
CAN.G1473.5 Capsicum annuum
CANSAT25G1232 Cannabis sativa
CARHR170620 Cardamine hirsuta
Carub.0005s2704 Capsella rubella
Ca_25802_v3 Cicer arietinum L.
Cc02_g25140 Coffea canephora
Cfa011066 Carpinus fangiana
Ciclev10020918m.g Citrus clementina
CiPaw.14G020200 Carya illinoinensis
COL.COLO4_12403 Corchorus olitorius
Cpa.g.sc22.64 Carica papaya
Cpa.g.sc22.65 Carica papaya
Cre13.g581801 Chlamydomonas reinhardtii
CSS0010598 Camellia sinensis var. sinensis
Dinv43613 Davidia involucrata
Duzib133G0968 Durio zibethinus
ECA240G0199 Erigeron canadensis
EL10Ac1g00757 Beta vulgaris
Eucgr.E01546 Eucalyptus grandis
FAN03G2893 Fragaria x ananassa
FAN06G0591 Fragaria x ananassa
FAN06G0853 Fragaria x ananassa
FAN10G0617 Fragaria x ananassa
FAN10G1802 Fragaria x ananassa
FvH4_7g10220 Fragaria vesca
Glyma.03G110700 Glycine max
Gohir.A12G097300 Gossypium hirsutum
Gohir.D12G100200 Gossypium hirsutum
Gorai.008G109100 Gossypium raimondii
GSVIVG01018284001 Vitis vinifera
HanXRQChr13g0423251 Helianthus annuus
Haze_02851 Corylus avellana
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla
HPP92_022101 Vanilla planifolia
HPP92_022105 Vanilla planifolia
HPP92_022132 Vanilla planifolia
Hund27407 Selenicereus undatus
Lalb_Chr07g0195411 Lupinus albus
Lj3g0014310 Lotus japonicus
Lj9A556T13 Lonicera japonica
Lsat_1_v5_gn_3_126900 Lactuca sativa
Manes.05G055200 Manihot esculenta
Mapoly0040s0025 Marchantia polymorpha
MCO13G420 Micromonas commoda
MD02G1213400 Malus domestica
Medtr5g027110 Medicago truncatula
Medtr8g006950 Medicago truncatula
Migut.B01532 Erythranthe guttata
MSTRG.20688 Avicennia marina
Nitab4.5_0000920g0010 Nicotiana tabacum
Nitab4.5_0007027g0020 Nicotiana tabacum
Nn1g00836 Nelumbo nucifera
Os11g0565400 Oryza sativa ssp. japonica
PGR042G0965 Punica granatum
PGSC0003DMG400025996 Solanum tuberosum
Phvul.010G049700 Phaseolus vulgaris
Potri.002G138000 Populus trichocarpa
Potri.014G048000 Populus trichocarpa
Prupe.2G132200 Prunus persica
Psat0s4856g0040 Pisum sativum
Psat0s4921g0040 Pisum sativum
Psat1g142600 Pisum sativum
Psat1g142640 Pisum sativum
Psat2g026240 Pisum sativum
Psat4g198120 Pisum sativum
Psat4g224200 Pisum sativum
Psat5g300840 Pisum sativum
Psat6g138360 Pisum sativum
PSO017G5203 Papaver somniferum
PSO675G1257 Papaver somniferum
PSO717G0092 Papaver somniferum
QL04p030124 Quercus lobata
QL04p089514 Quercus lobata
RcHm_v2.0_Chr1g0347961 Rosa chinensis
Rhsim07G0036200 Rhododendron simsii
Sabra02G0106500 Salix brachista
SalBow5G3575 Salvia bowleyana
Sc02g0003120 Simmondsia chinensis
SGA_v2.0_scaffold340G49324 Striga asiatica
SMO352G0084 Selaginella moellendorffii
Solyc01g090220.4 Solanum lycopersicum
Sopen01g036020 Solanum pennellii
Sp5g02920 Schrenkiella parvula
TAR629G0179 Trochodendron aralioides
THA.LOC104817188 Tarenaya hassleriana
Thecc.01G395400 Theobroma cacao
Thhalv10006060m.g Eutrema salsugineum
TPR.G33124 Trifolium pratense
TWI14G0580 Tripterygium wilfordii
unitig_750.g28410 Utricularia gibba
vmacro13499 Vaccinium macrocarpon
vmacro13524 Vaccinium macrocarpon
VMungo0331G1797 Vigna mungo
Zm00001eb200010 Zea mays

User provided reference genes

Program Settings