Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p54180 Brassica napus
Aa31LG10G16050 Aethionema arabicum
Aa31LG10G640 Aethionema arabicum
Actinidia21334 Actinidia chinensis
Ah.12g061380 Amaranthus hybridus
AL5G44760 Arabidopsis lyrata
AL5G44880 Arabidopsis lyrata
Aqoxy2G02436 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea
AT3G62080 Arabidopsis thaliana
ATR0796G131 Amborella trichopoda
Atru.chr5.848 Acer truncatum
AUR62001071 Chenopodium quinoa
AUR62031719 Chenopodium quinoa
AUR62032606 Chenopodium quinoa
BcaC07g40700 Brassica carinata
BolC8t51281H Brassica oleracea
BraA09t40830Z Brassica rapa
C08p37040 Brassica napus
CAN.G179.29 Capsicum annuum
CANSAT25G0194 Cannabis sativa
CARHR172420 Cardamine hirsuta
Carub.0005s2883 Capsella rubella
Ca_09251_v3 Cicer arietinum L.
CBR_g12374 Chara braunii
Cc01_g21740 Coffea canephora
CDE01G0777 Ceratophyllum demersum
Cfa004921 Carpinus fangiana
Ciclev10020225m.g Citrus clementina
CiPaw.08G082000 Carya illinoinensis
ClCG01G007130 Citrullus lanatus
COL.COLO4_23116 Corchorus olitorius
Cpa.g.sc57.31 Carica papaya
CsaV3_5G017580 Cucumis sativus L.
CsaV3_5G024470 Cucumis sativus L.
CSS0011680 Camellia sinensis var. sinensis
DCAR_012294 Daucus carota
Dinv12076 Davidia involucrata
Duzib138G0585 Durio zibethinus
EL10Ac9g22392 Beta vulgaris
Eucgr.A00997 Eucalyptus grandis
FAN19G1238 Fragaria x ananassa
FAN23G1444 Fragaria x ananassa
FAN26G0527 Fragaria x ananassa
FvH4_1g26150 Fragaria vesca
Glyma.19G222100 Glycine max
Gohir.A12G119200 Gossypium hirsutum
Gohir.D12G123000 Gossypium hirsutum
Gorai.008G133900 Gossypium raimondii
GSVIVG01028237001 Vitis vinifera
HanXRQChr06g0167961 Helianthus annuus
Haze_05159 Corylus avellana
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla
HPP92_001172 Vanilla planifolia
HPP92_010139 Vanilla planifolia
Lalb_Chr18g0046351 Lupinus albus
Lj1g0008019 Lotus japonicus
Lsat_1_v5_gn_8_167261 Lactuca sativa
Manes.05G007900 Manihot esculenta
Mapoly0053s0040 Marchantia polymorpha
MBI18_g03845_MAGBIO Magnolia biondii
MD09G1291400 Malus domestica
Medtr7g110820 Medicago truncatula
MELO3C005199.2 Cucumis melo
MELO3C005268.2 Cucumis melo
MELO3C005269.2 Cucumis melo
MELO3C026294.2 Cucumis melo
MELO3C028884.2 Cucumis melo
MELO3C029443.2 Cucumis melo
MELO3C032404.2 Cucumis melo
MELO3C032406.2 Cucumis melo
MELO3C033776.2 Cucumis melo
Migut.D01683 Erythranthe guttata
MSTRG.21731 Avicennia marina
Nitab4.5_0003092g0080 Nicotiana tabacum
Nitab4.5_0007915g0010 Nicotiana tabacum
Nn4g25303 Nelumbo nucifera
Oeu008276.1 Olea europaea
Os01g0286000 Oryza sativa ssp. japonica
Peaxi162Scf00309g00622 Petunia axillaris
Peaxi162Scf00309g00627 Petunia axillaris
PGR042G0322 Punica granatum
PGSC0003DMG401001116 Solanum tuberosum
Phvul.001G218900 Phaseolus vulgaris
Potri.002G186100 Populus trichocarpa
Pp3c3_29200 Physcomitrium patens
Prupe.3G001500 Prunus persica
Psat3g017400 Pisum sativum
PSO210G3353 Papaver somniferum
PSO761G0283 Papaver somniferum
QL12p035081 Quercus lobata
QL12p035100 Quercus lobata
RcHm_v2.0_Chr3g0485641 Rosa chinensis
Rhsim01G0000800 Rhododendron simsii
Sabra02G0148600 Salix brachista
Sc05g0000050 Simmondsia chinensis
Sc05g0000060 Simmondsia chinensis
Sed0016094 Sechium edule
SGA_v2.0_scaffold310G48195 Striga asiatica
SGA_v2.0_scaffold81G26073 Striga asiatica
SMO339G0071 Selaginella moellendorffii
Solyc01g079060.4 Solanum lycopersicum
Sopen01g030580 Solanum pennellii
Sp5g01290 Schrenkiella parvula
TAR636G0448 Trochodendron aralioides
THA.LOC104817424 Tarenaya hassleriana
Thecc.01G326600 Theobroma cacao
Thhalv10005996m.g Eutrema salsugineum
TPR.G8370 Trifolium pratense
TWI14G0919 Tripterygium wilfordii
TWI59G0932 Tripterygium wilfordii
vmacro02354 Vaccinium macrocarpon
vmacro15952 Vaccinium macrocarpon
VMungo1383G1632 Vigna mungo
Zm00001eb129510 Zea mays

User provided reference genes

Program Settings