Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p31130 Brassica napus
Aa31LG3G1390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2731 Anthoceros agrestis
Actinidia01006 Actinidia chinensis
Actinidia01007 Actinidia chinensis
Actinidia07785 Actinidia chinensis
Ah.11g042410 Amaranthus hybridus
AL4G34430 Arabidopsis lyrata
AL4G38640 Arabidopsis lyrata
Aqoxy4G03267 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NJ2MZ3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZF4YMU Arachis hypogaea
AT2G40760 Arabidopsis thaliana
ATR1127G060 Amborella trichopoda
Atru.chr12.200 Acer truncatum
AUR62024944 Chenopodium quinoa
AUR62030595 Chenopodium quinoa
BcaB01g03517 Brassica carinata
BcaC01g05379 Brassica carinata
BolC4t28352H Brassica oleracea
BraA04t18568Z Brassica rapa
C03p27200 Brassica napus
C04p68530 Brassica napus
CAN.G788.6 Capsicum annuum
CANSAT56G4251 Cannabis sativa
CARHR135850 Cardamine hirsuta
Carub.0004s2305 Capsella rubella
Ca_05520_v3 Cicer arietinum L.
CBR_g6711 Chara braunii
Cc02_g05260 Coffea canephora
CDE04G0642 Ceratophyllum demersum
CDE04G1689 Ceratophyllum demersum
Cfa001200 Carpinus fangiana
Ciclev10031468m.g Citrus clementina
CiPaw.01G307100 Carya illinoinensis
ClCG07G005250 Citrullus lanatus
COL.COLO4_19467 Corchorus olitorius
Cpa.g.sc19.43 Carica papaya
CsaV3_5G011090 Cucumis sativus L.
CSS0048250 Camellia sinensis var. sinensis
CSS0049786 Camellia sinensis var. sinensis
DCAR_005878 Daucus carota
Dinv34497 Davidia involucrata
Duzib114G0530 Durio zibethinus
Duzib128G0149 Durio zibethinus
ECA232G1360 Erigeron canadensis
EL10Ac2g02658 Beta vulgaris
Eucgr.G03146 Eucalyptus grandis
FAN01G1883 Fragaria x ananassa
FAN03G0212 Fragaria x ananassa
FAN06G4065 Fragaria x ananassa
FAN10G1315 Fragaria x ananassa
FvH4_7g26040 Fragaria vesca
Glyma.02G218900 Glycine max
Gohir.A10G177900 Gossypium hirsutum
Gohir.D10G184500 Gossypium hirsutum
Gorai.011G206700 Gossypium raimondii
GSVIVG01032660001 Vitis vinifera
HanXRQChr09g0252611 Helianthus annuus
HanXRQChr15g0493701 Helianthus annuus
Haze_17366 Corylus avellana
Hma1.2p1_0572F.1_g181300 Hydrangea macrophylla
HPP92_006691 Vanilla planifolia
Hund13440 Selenicereus undatus
Lalb_Chr10g0102821 Lupinus albus
Lj1A968T56 Lonicera japonica
LjContig00408g0020575 Lotus japonicus
Lsat_1_v5_gn_9_60220 Lactuca sativa
Manes.07G142300 Manihot esculenta
Mapoly0111s0046 Marchantia polymorpha
MBI15_g39385_MAGBIO Magnolia biondii
MD01G1168900 Malus domestica
MD07G1234800 Malus domestica
Medtr5g067730 Medicago truncatula
MELO3C034188.2 Cucumis melo
MELO3C034382.2 Cucumis melo
Migut.F00571 Erythranthe guttata
Nitab4.5_0000171g0200 Nicotiana tabacum
Nitab4.5_0005454g0010 Nicotiana tabacum
Nn2g10277 Nelumbo nucifera
Oeu008105.1 Olea europaea
Os05g0323100 Oryza sativa ssp. japonica
Peaxi162Scf00073g02343 Petunia axillaris
PGR142G0552 Punica granatum
Phvul.008G186100 Phaseolus vulgaris
Potri.019G059400 Populus trichocarpa
Pp3c16_12120 Physcomitrium patens
Pp3c5_13810 Physcomitrium patens
Prupe.2G265100 Prunus persica
Psat2g062800 Pisum sativum
PSO017G1173 Papaver somniferum
PSO170G2165 Papaver somniferum
QL08p065047 Quercus lobata
RcHm_v2.0_Chr1g0372451 Rosa chinensis
Rhsim09G0186200 Rhododendron simsii
Sabra19G0074600 Salix brachista
Sc10g0003040 Simmondsia chinensis
Sed0002395 Sechium edule
SEGI_00934 Sequoiadendron giganteum
SGA_v2.0_scaffold60G20881 Striga asiatica
SHI18720 Sapria himalayana
SMO367G0869 Selaginella moellendorffii
Solyc03g095760.3 Solanum lycopersicum
Sopen03g025680 Solanum pennellii
Sp4g23070 Schrenkiella parvula
TAR369G1120 Trochodendron aralioides
THA.LOC104803214 Tarenaya hassleriana
Thecc.10G184400 Theobroma cacao
Thhalv10016615m.g Eutrema salsugineum
TPR.G33940 Trifolium pratense
TWI09G1357 Tripterygium wilfordii
unitig_748.g7010 Utricularia gibba
vmacro09954 Vaccinium macrocarpon
vmacro23415 Vaccinium macrocarpon
vmacro23416 Vaccinium macrocarpon
VMungo0647G0955 Vigna mungo
Zm00001eb285060 Zea mays

User provided reference genes

Program Settings