Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p34480 Brassica napus
Aa31LG1G27980 Aethionema arabicum
Actinidia28110 Actinidia chinensis
Actinidia28403 Actinidia chinensis
AL4G46010 Arabidopsis lyrata
Aqoxy5G04296 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea
AT2G46580 Arabidopsis thaliana
ATR0757G161 Amborella trichopoda
Atru.chr5.703 Acer truncatum
AUR62004514 Chenopodium quinoa
AUR62022739 Chenopodium quinoa
BcaC02g07019 Brassica carinata
BcaC02g07042 Brassica carinata
BcaNung06661 Brassica carinata
BolC4t28712H Brassica oleracea
BraA04t18906Z Brassica rapa
C04p72250 Brassica napus
CAN.G360.5 Capsicum annuum
CANSAT56G3067 Cannabis sativa
CARHR141930 Cardamine hirsuta
Carub.0004s2930 Capsella rubella
Ca_23515_v3 Cicer arietinum L.
CBR_g3312 Chara braunii
Cc02_g39620 Coffea canephora
CDE02G1978 Ceratophyllum demersum
Cfa003780 Carpinus fangiana
Ciclev10022329m.g Citrus clementina
CiPaw.01G078200 Carya illinoinensis
ClCG05G000710 Citrullus lanatus
COL.COLO4_06235 Corchorus olitorius
Cpa.g.sc96.56 Carica papaya
Cre02.g095100 Chlamydomonas reinhardtii
CsaV3_3G007930 Cucumis sativus L.
CSS0047897 Camellia sinensis var. sinensis
DCAR_006978 Daucus carota
Dinv32607 Davidia involucrata
Duzib133G0719 Durio zibethinus
ECA234G0680 Erigeron canadensis
EL10Ac1g00239 Beta vulgaris
Eucgr.D02387 Eucalyptus grandis
FAN01G2684 Fragaria x ananassa
FAN03G0355 Fragaria x ananassa
FAN06G2200 Fragaria x ananassa
FAN06G4713 Fragaria x ananassa
FAN10G3002 Fragaria x ananassa
FvH4_7g16970 Fragaria vesca
Glyma.16G023100 Glycine max
Gohir.A07G136500 Gossypium hirsutum
Gohir.D07G141900 Gossypium hirsutum
Gorai.001G153500 Gossypium raimondii
GSVIVG01027181001 Vitis vinifera
HanXRQChr16g0524761 Helianthus annuus
Haze_15680 Corylus avellana
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla
HPP92_015098 Vanilla planifolia
Hund19453 Selenicereus undatus
Hund27184 Selenicereus undatus
Lalb_Chr10g0100681 Lupinus albus
Lj3g0003520 Lotus japonicus
Lj7A496T103 Lonicera japonica
Lsat_1_v5_gn_4_30860 Lactuca sativa
Manes.05G020900 Manihot esculenta
Mapoly0085s0082 Marchantia polymorpha
MBI04_g28825_MAGBIO Magnolia biondii
MCO05G651 Micromonas commoda
MD01G1084300 Malus domestica
Medtr8g027365 Medicago truncatula
MELO3C006011.2 Cucumis melo
Migut.N01531 Erythranthe guttata
MSTRG.28272 Avicennia marina
Nitab4.5_0000258g0260 Nicotiana tabacum
Nitab4.5_0003865g0100 Nicotiana tabacum
Nn1g00327 Nelumbo nucifera
Oeu004961.1 Olea europaea
Os03g0115500 Oryza sativa ssp. japonica
Peaxi162Scf00716g00425 Petunia axillaris
PGR031G0964 Punica granatum
PGSC0003DMG400007008 Solanum tuberosum
Phvul.010G115400 Phaseolus vulgaris
Potri.002G173800 Populus trichocarpa
Potri.014G100700 Populus trichocarpa
Pp3c7_90 Physcomitrium patens
PRCOL_00000497 Prasinoderma coloniale
Prupe.2G192000 Prunus persica
PSO063G7217 Papaver somniferum
PSO170G4931 Papaver somniferum
QL08p045855 Quercus lobata
RcHm_v2.0_Chr1g0360221 Rosa chinensis
Rhsim01G0174600 Rhododendron simsii
Sabra02G0139600 Salix brachista
Sabra14G0074100 Salix brachista
Sc01g0002470 Simmondsia chinensis
Sed0016971 Sechium edule
SEGI_21315 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43545 Striga asiatica
SMO119G0236 Selaginella moellendorffii
Solyc05g050530.3 Solanum lycopersicum
Sopen05g028950 Solanum pennellii
Sp4g28630 Schrenkiella parvula
TAR629G1880 Trochodendron aralioides
TAR636G3419 Trochodendron aralioides
THA.LOC104827623 Tarenaya hassleriana
Thecc.01G339500 Theobroma cacao
Thhalv10001639m.g Eutrema salsugineum
TPR.G20231 Trifolium pratense
TWI23G0686 Tripterygium wilfordii
TWI59G0194 Tripterygium wilfordii
unitig_21.g20560 Utricularia gibba
vmacro12664 Vaccinium macrocarpon
VMungo0331G1134 Vigna mungo
Zm00001eb001050 Zea mays

User provided reference genes

Program Settings