Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia02903 Actinidia chinensis
Actinidia13165 Actinidia chinensis
arahy.Tifrunner.gnm1.ann1.71B432 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AC77RP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F5D7CA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J5YN7E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KB6CC9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KX701I Arachis hypogaea
Atru.chr12.266 Acer truncatum
Atru.chr8.2090 Acer truncatum
CAN.G697.1 Capsicum annuum
Cc06_g02080 Coffea canephora
CDE02G2266 Ceratophyllum demersum
Cfa001402 Carpinus fangiana
Ciclev10013234m.g Citrus clementina
Ciclev10033223m.g Citrus clementina
CiPaw.01G293100 Carya illinoinensis
CiPaw.09G201300 Carya illinoinensis
CiPaw.10G149300 Carya illinoinensis
ClCG04G007580 Citrullus lanatus
COL.COLO4_14695 Corchorus olitorius
COL.COLO4_36543 Corchorus olitorius
Cpa.g.sc19.256 Carica papaya
Cpa.g.sc56.60 Carica papaya
CsaV3_4G025600 Cucumis sativus L.
CSS0005500 Camellia sinensis var. sinensis
CSS0009632 Camellia sinensis var. sinensis
CSS0011916 Camellia sinensis var. sinensis
CSS0014654 Camellia sinensis var. sinensis
CSS0020330 Camellia sinensis var. sinensis
DCAR_028810 Daucus carota
Dinv34454 Davidia involucrata
Dinv37115 Davidia involucrata
Eucgr.G02995 Eucalyptus grandis
Eucgr.G02997 Eucalyptus grandis
FAN02G3144 Fragaria x ananassa
FAN05G3252 Fragaria x ananassa
FAN09G3730 Fragaria x ananassa
FAN14G5964 Fragaria x ananassa
FvH4_6g12730 Fragaria vesca
Glyma.01G105400 Glycine max
Glyma.03G073200 Glycine max
Glyma.04G105400 Glycine max
Glyma.07G139200 Glycine max
Glyma.18G033400 Glycine max
Glyma.18G189800 Glycine max
Gohir.A04G085600 Gossypium hirsutum
Gohir.A09G152400 Gossypium hirsutum
Gohir.A10G225300 Gossypium hirsutum
Gohir.D04G125400 Gossypium hirsutum
Gohir.D09G148100 Gossypium hirsutum
Gohir.D10G238364 Gossypium hirsutum
Gorai.006G169100 Gossypium raimondii
Gorai.011G273300 Gossypium raimondii
Gorai.012G108500 Gossypium raimondii
GSVIVG01016437001 Vitis vinifera
GSVIVG01034067001 Vitis vinifera
HanXRQChr05g0156901 Helianthus annuus
HanXRQChr08g0221291 Helianthus annuus
Haze_17150 Corylus avellana
Haze_18710 Corylus avellana
Haze_20883 Corylus avellana
Haze_20892 Corylus avellana
Hma1.2p1_0039F.1_g024865 Hydrangea macrophylla
Hma1.2p1_0039F.1_g024870 Hydrangea macrophylla
HPP92_019858 Vanilla planifolia
Lalb_Chr03g0042701 Lupinus albus
Lalb_Chr19g0125031 Lupinus albus
Lj1g0020029 Lotus japonicus
Lj3g0005144 Lotus japonicus
Lj6g0007525 Lotus japonicus
Lsat_1_v5_gn_9_32981 Lactuca sativa
Manes.07G122400 Manihot esculenta
Manes.08G082100 Manihot esculenta
Manes.09G098400 Manihot esculenta
Manes.10G021300 Manihot esculenta
MBI05_g02667_MAGBIO Magnolia biondii
MBI14_g02865_MAGBIO Magnolia biondii
MBI14_g02866_MAGBIO Magnolia biondii
MD04G1138900 Malus domestica
MD12G1154700 Malus domestica
Medtr3g069540 Medicago truncatula
Medtr4g019640 Medicago truncatula
Medtr7g065130 Medicago truncatula
MELO3C033485.2 Cucumis melo
Nn2g13528 Nelumbo nucifera
PGSC0003DMG400024270 Solanum tuberosum
Phvul.001G238200 Phaseolus vulgaris
Phvul.008G114100 Phaseolus vulgaris
Phvul.010G009200 Phaseolus vulgaris
Potri.006G092300 Populus trichocarpa
Potri.008G061600 Populus trichocarpa
Potri.010G196500 Populus trichocarpa
Potri.016G103900 Populus trichocarpa
Prupe.6G264500 Prunus persica
Psat3g133520 Pisum sativum
Psat7g241320 Pisum sativum
RcHm_v2.0_Chr3g0464651 Rosa chinensis
Rhsim05G0199800 Rhododendron simsii
Sabra06G0070000 Salix brachista
Sabra08G0045200 Salix brachista
Sabra10G0151100 Salix brachista
SalBow6G4181 Salvia bowleyana
SalBow6G4537 Salvia bowleyana
Sc07g0007010 Simmondsia chinensis
Sed0015200 Sechium edule
Sopen03g027280 Solanum pennellii
Sopen09g006180 Solanum pennellii
Sopen09g006190 Solanum pennellii
TAR623G0452 Trochodendron aralioides
TAR633G0729 Trochodendron aralioides
TAR636G2473 Trochodendron aralioides
Thecc.05G029200 Theobroma cacao
Thecc.10G031400 Theobroma cacao
TPR.G32561 Trifolium pratense
TPR.G33720 Trifolium pratense
TPR.G34921 Trifolium pratense

User provided reference genes

Program Settings