Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p32490 Brassica napus
A03p42890 Brassica napus
A05p43220 Brassica napus
Aa31LG5G14670 Aethionema arabicum
Actinidia25755 Actinidia chinensis
Actinidia33264 Actinidia chinensis
Ah.03g133830 Amaranthus hybridus
AL3G14040 Arabidopsis lyrata
Aqoxy5G03537 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5FY1X2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QBYX8U Arachis hypogaea
AT3G04130 Arabidopsis thaliana
ATR0665G502 Amborella trichopoda
Atru.chr11.2237 Acer truncatum
AUR62024165 Chenopodium quinoa
BcaC05g29964 Brassica carinata
BcaC05g30215 Brassica carinata
BcaC05g30216 Brassica carinata
BolC5t34951H Brassica oleracea
BraA05t23064Z Brassica rapa
C05p62960 Brassica napus
CAN.G1038.8 Capsicum annuum
CANSAT01G2133 Cannabis sativa
CARHR078260 Cardamine hirsuta
Carub.0003s0338 Capsella rubella
Ca_27827_v3 Cicer arietinum L.
Cc02_g24080 Coffea canephora
CDE06G1162 Ceratophyllum demersum
Cfa009309 Carpinus fangiana
Ciclev10031257m.g Citrus clementina
CiPaw.05G116100 Carya illinoinensis
COL.COLO4_23614 Corchorus olitorius
Cpa.g.sc43.4 Carica papaya
Cpa.g.sc43.5 Carica papaya
CsaV3_5G030530 Cucumis sativus L.
DCAR_013708 Daucus carota
DCAR_024082 Daucus carota
Dinv10995 Davidia involucrata
ECA233G0630 Erigeron canadensis
EL10Ac6g13428 Beta vulgaris
Eucgr.H04672 Eucalyptus grandis
Eucgr.J02931 Eucalyptus grandis
FAN04G2222 Fragaria x ananassa
FAN12G1611 Fragaria x ananassa
FAN13G0831 Fragaria x ananassa
FAN17G1312 Fragaria x ananassa
FAN18G2809 Fragaria x ananassa
FvH4_4g36630 Fragaria vesca
FvH4_5g29890 Fragaria vesca
Glyma.16G058400 Glycine max
Glyma.19G088850 Glycine max
Gohir.A03G129100 Gossypium hirsutum
Gohir.D02G152900 Gossypium hirsutum
Gorai.005G172000 Gossypium raimondii
GSVIVG01010329001 Vitis vinifera
GSVIVG01018015001 Vitis vinifera
HanXRQChr08g0207401 Helianthus annuus
HanXRQChr08g0207431 Helianthus annuus
HanXRQChr08g0207451 Helianthus annuus
Haze_12359 Corylus avellana
Haze_12363 Corylus avellana
Haze_12394 Corylus avellana
Hma1.2p1_0856F.1_g229090 Hydrangea macrophylla
HPP92_008081 Vanilla planifolia
Hund25436 Selenicereus undatus
Lalb_Chr12g0210351 Lupinus albus
Lj5g0012330 Lotus japonicus
Lj6g0011408 Lotus japonicus
Lj6P821T28 Lonicera japonica
Lsat_1_v5_gn_8_151840 Lactuca sativa
Manes.13G015300 Manihot esculenta
MBI07_g21926_MAGBIO Magnolia biondii
MBI16_g31774_MAGBIO Magnolia biondii
MBI16_g31775_MAGBIO Magnolia biondii
MBI16_g37878_MAGBIO Magnolia biondii
MBI16_g37879_MAGBIO Magnolia biondii
MD17G1227800 Malus domestica
MD17G1228100 Malus domestica
Medtr1g056160 Medicago truncatula
Medtr7g005780 Medicago truncatula
Medtr7g029515 Medicago truncatula
Migut.K00691 Erythranthe guttata
MSTRG.7975 Avicennia marina
Nitab4.5_0000085g0350 Nicotiana tabacum
Nitab4.5_0001898g0020 Nicotiana tabacum
Nn3g18338 Nelumbo nucifera
Oeu020314.1 Olea europaea
Os02g0601600 Oryza sativa ssp. japonica
Peaxi162Scf00128g00087 Petunia axillaris
PGR031G1616 Punica granatum
PGR119G1668 Punica granatum
PGSC0003DMG400017435 Solanum tuberosum
Phvul.001G095200 Phaseolus vulgaris
Potri.008G179201 Populus trichocarpa
Potri.010G055500 Populus trichocarpa
Prupe.3G105000 Prunus persica
Psat7g264040 Pisum sativum
PSO782G4466 Papaver somniferum
QL03p055001 Quercus lobata
RcHm_v2.0_Chr1g0322101 Rosa chinensis
RcHm_v2.0_Chr7g0223501 Rosa chinensis
Rhsim12G0106100 Rhododendron simsii
Sabra10G0049500 Salix brachista
SalBow2G1939 Salvia bowleyana
Sc11g0000690 Simmondsia chinensis
Sed0028237 Sechium edule
SGA_v2.0_scaffold34G13606 Striga asiatica
Solyc05g014490.3 Solanum lycopersicum
Sopen05g009570 Solanum pennellii
Sp3g03100 Schrenkiella parvula
TAR374G1548 Trochodendron aralioides
THA.LOC104805256 Tarenaya hassleriana
Thecc.02G273600 Theobroma cacao
Thhalv10020548m.g Eutrema salsugineum
TPR.G38275 Trifolium pratense
TWI09G0390 Tripterygium wilfordii
Zm00001eb246390 Zea mays

User provided reference genes

Program Settings