Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p31680 Brassica napus
A06p44680 Brassica napus
Actinidia13067 Actinidia chinensis
Actinidia15238 Actinidia chinensis
Actinidia16704 Actinidia chinensis
Actinidia27647 Actinidia chinensis
Actinidia31986 Actinidia chinensis
Ah.02g128120 Amaranthus hybridus
AL5G10050 Arabidopsis lyrata
AT2G01100 Arabidopsis thaliana
ATR0691G199 Amborella trichopoda
Atru.chr11.355 Acer truncatum
BcaC03g16993 Brassica carinata
BcaC06g31334 Brassica carinata
BolC2t10986H Brassica oleracea
BolC2t10996H Brassica oleracea
BraA02t08174Z Brassica rapa
BraA06t27341Z Brassica rapa
C02p49020 Brassica napus
C02p49060 Brassica napus
C07p31520 Brassica napus
CAN.G1489.6 Capsicum annuum
CANSAT01G0870 Cannabis sativa
CARHR143650 Cardamine hirsuta
Carub.0005s0008 Capsella rubella
Ca_23696_v3 Cicer arietinum L.
Cc11_g09160 Coffea canephora
CDE06G2249 Ceratophyllum demersum
CDE07G0564 Ceratophyllum demersum
Cfa015795 Carpinus fangiana
Ciclev10015782m.g Citrus clementina
CiPaw.05G246200 Carya illinoinensis
CiPaw.06G014500 Carya illinoinensis
COL.COLO4_06026 Corchorus olitorius
Cpa.g.sc65.99 Carica papaya
CsaV3_5G034830 Cucumis sativus L.
DCAR_030189 Daucus carota
Dinv04892 Davidia involucrata
Dinv16171 Davidia involucrata
Duzib251G0133 Durio zibethinus
ECA233G4197 Erigeron canadensis
EL10Ac6g14263 Beta vulgaris
Eucgr.B02880 Eucalyptus grandis
FAN07G2347 Fragaria x ananassa
FAN12G3352 Fragaria x ananassa
FAN17G0786 Fragaria x ananassa
FAN22G0565 Fragaria x ananassa
FvH4_4g26261 Fragaria vesca
FvH4_4g26263 Fragaria vesca
Glyma.10G266900 Glycine max
Glyma.20G123800 Glycine max
Gohir.A05G317300 Gossypium hirsutum
Gohir.D05G319100 Gossypium hirsutum
Gorai.009G342100 Gossypium raimondii
HanXRQChr08g0212941 Helianthus annuus
HanXRQChr15g0466201 Helianthus annuus
Haze_00698 Corylus avellana
Hma1.2p1_0114F.1_g055420 Hydrangea macrophylla
HPP92_004883 Vanilla planifolia
Lalb_Chr06g0165691 Lupinus albus
Lalb_Chr21g0308581 Lupinus albus
Lj3P876T20 Lonicera japonica
Lj5g0023497 Lotus japonicus
Manes.14G110300 Manihot esculenta
MBI07_g24344_MAGBIO Magnolia biondii
MBI14_g18756_MAGBIO Magnolia biondii
MBI14_g31960_MAGBIO Magnolia biondii
MBI16_g21172_MAGBIO Magnolia biondii
MD13G1031200 Malus domestica
MD16G1033400 Malus domestica
Medtr1g108700 Medicago truncatula
MELO3C012294.2 Cucumis melo
Migut.L00652 Erythranthe guttata
Migut.L00827 Erythranthe guttata
MSTRG.877 Avicennia marina
Nitab4.5_0000350g0190 Nicotiana tabacum
Nitab4.5_0004524g0040 Nicotiana tabacum
Nn4g24045 Nelumbo nucifera
Oeu004318.1 Olea europaea
Oeu044323.1 Olea europaea
Os01g0120700 Oryza sativa ssp. japonica
Peaxi162Scf00205g00914 Petunia axillaris
PGR119G2007 Punica granatum
PGSC0003DMG400030513 Solanum tuberosum
Phvul.007G035100 Phaseolus vulgaris
Potri.008G126800 Populus trichocarpa
Prupe.1G320900 Prunus persica
Psat6g222160 Pisum sativum
PSO017G0369 Papaver somniferum
PSO478G3468 Papaver somniferum
QL01p002793 Quercus lobata
RcHm_v2.0_Chr4g0433871 Rosa chinensis
Rhsim09G0068700 Rhododendron simsii
Rhsim09G0068900 Rhododendron simsii
Sabra08G0095700 Salix brachista
SalBow8G0138 Salvia bowleyana
Sc04g0005790 Simmondsia chinensis
Sed0014835 Sechium edule
Sed0020048 Sechium edule
SEGI_30462 Sequoiadendron giganteum
SGA_v2.0_scaffold50G18534 Striga asiatica
SHI16291 Sapria himalayana
Solyc05g008440.3 Solanum lycopersicum
Sopen05g004270 Solanum pennellii
Sp2g12570 Schrenkiella parvula
TAR371G0416 Trochodendron aralioides
TAR622G0373 Trochodendron aralioides
TAR629G2134 Trochodendron aralioides
THA.LOC104824159 Tarenaya hassleriana
Thecc.02G217300 Theobroma cacao
Thhalv10001024m.g Eutrema salsugineum
TPR.G4844 Trifolium pratense
TWI31G0003 Tripterygium wilfordii
TWI79G1374 Tripterygium wilfordii
unitig_26.g10011 Utricularia gibba
VMungo0720G0754 Vigna mungo
Zm00001eb126340 Zea mays
Zm00001eb334820 Zea mays

User provided reference genes

Program Settings