Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aqoxy3G01626 Aquilegia oxysepala
Aqoxy5G03286 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0J46GK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MRR6R9 Arachis hypogaea
ATR0582G094 Amborella trichopoda
Atru.chr6.1845 Acer truncatum
CAN.G732.21 Capsicum annuum
CANSAT01G1989 Cannabis sativa
Cc11_g17250 Coffea canephora
CDE05G2305 Ceratophyllum demersum
Cfa009391 Carpinus fangiana
Cfa018768 Carpinus fangiana
Ciclev10032794m.g Citrus clementina
Ciclev10032833m.g Citrus clementina
CiPaw.05G106700 Carya illinoinensis
CiPaw.06G105600 Carya illinoinensis
CiPaw.11G004900 Carya illinoinensis
ClCG03G003920 Citrullus lanatus
ClCG06G002000 Citrullus lanatus
COL.COLO4_36213 Corchorus olitorius
Cpa.g.sc4.165 Carica papaya
CsaV3_6G008060 Cucumis sativus L.
CSS0011599 Camellia sinensis var. sinensis
CSS0016059 Camellia sinensis var. sinensis
DCAR_021637 Daucus carota
DCAR_021638 Daucus carota
Dinv23173 Davidia involucrata
Duzib068G0517 Durio zibethinus
Duzib084G1105 Durio zibethinus
ECA232G3539 Erigeron canadensis
FAN06G3947 Fragaria x ananassa
FAN08G0669 Fragaria x ananassa
FAN12G4201 Fragaria x ananassa
FAN13G1779 Fragaria x ananassa
FAN15G2538 Fragaria x ananassa
FAN17G1902 Fragaria x ananassa
FAN18G2199 Fragaria x ananassa
FAN28G2669 Fragaria x ananassa
FvH4_4g23360 Fragaria vesca
FvH4_5g08680 Fragaria vesca
Glyma.05G203500 Glycine max
Gohir.A01G022800 Gossypium hirsutum
Gohir.A12G190800 Gossypium hirsutum
Gohir.D01G020800 Gossypium hirsutum
Gohir.D03G112366 Gossypium hirsutum
Gohir.D12G192900 Gossypium hirsutum
Gorai.002G023300 Gossypium raimondii
Gorai.008G207700 Gossypium raimondii
GSVIVG01008577001 Vitis vinifera
HanXRQChr05g0153821 Helianthus annuus
HanXRQChr08g0236471 Helianthus annuus
HanXRQChr09g0273431 Helianthus annuus
Haze_07172 Corylus avellana
Lalb_Chr07g0183561 Lupinus albus
Lalb_Chr13g0297191 Lupinus albus
Lj4g0016206 Lotus japonicus
Lsat_1_v5_gn_4_82360 Lactuca sativa
Lsat_1_v5_gn_5_11900 Lactuca sativa
Manes.12G008000 Manihot esculenta
Manes.13G008500 Manihot esculenta
Manes.14G048800 Manihot esculenta
MBI07_g27870_MAGBIO Magnolia biondii
MBI07_g46909_MAGBIO Magnolia biondii
MD06G1137900 Malus domestica
MD14G1153300 Malus domestica
MD16G1123500 Malus domestica
Medtr8g096640 Medicago truncatula
MELO3C022330.2 Cucumis melo
Migut.K01007 Erythranthe guttata
Migut.M01219 Erythranthe guttata
MSTRG.7284 Avicennia marina
Nitab4.5_0000021g1020 Nicotiana tabacum
Nitab4.5_0002530g0020 Nicotiana tabacum
Nn3g16393 Nelumbo nucifera
Nn4g22252 Nelumbo nucifera
Oeu001326.1 Olea europaea
Oeu001327.1 Olea europaea
Oeu001328.1 Olea europaea
Oeu012652.1 Olea europaea
Os01g0924200 Oryza sativa ssp. japonica
Os12g0460100 Oryza sativa ssp. japonica
Os12g0460400 Oryza sativa ssp. japonica
PGR119G1209 Punica granatum
PGSC0003DMG400026484 Solanum tuberosum
Phvul.002G285300 Phaseolus vulgaris
Potri.001G059800 Populus trichocarpa
Potri.003G168200 Populus trichocarpa
Potri.012G101800 Populus trichocarpa
Potri.015G099800 Populus trichocarpa
Prupe.1G222200 Prunus persica
Prupe.5G148200 Prunus persica
Psat7g036960 Pisum sativum
PSO017G1627 Papaver somniferum
PSO017G6998 Papaver somniferum
QL03p051584 Quercus lobata
QL10p002347 Quercus lobata
RcHm_v2.0_Chr4g0429751 Rosa chinensis
RcHm_v2.0_Chr7g0189701 Rosa chinensis
Rhsim12G0023500 Rhododendron simsii
Rhsim12G0176800 Rhododendron simsii
Rhsim12G0177300 Rhododendron simsii
Sabra01G0042900 Salix brachista
Sabra03G0123300 Salix brachista
Sabra15G0120500 Salix brachista
Sc22g0003750 Simmondsia chinensis
Sed0003161 Sechium edule
Sed0005097 Sechium edule
Solyc03g097430.1 Solanum lycopersicum
Sopen03g028190 Solanum pennellii
TAR374G0918 Trochodendron aralioides
TAR622G0366 Trochodendron aralioides
TAR629G3154 Trochodendron aralioides
Thecc.02G201200 Theobroma cacao
Thecc.03G133000 Theobroma cacao
TPR.G28777 Trifolium pratense
VMungo0251G2992 Vigna mungo
Zm00001eb142990 Zea mays
Zm00001eb364140 Zea mays

User provided reference genes

Program Settings