Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27070 Brassica napus
Aa31LG5G9870 Aethionema arabicum
Actinidia13340 Actinidia chinensis
Actinidia26065 Actinidia chinensis
Ah.10g034920 Amaranthus hybridus
Ah.16g105880 Amaranthus hybridus
AL4G17470 Arabidopsis lyrata
Aqoxy7G01458 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K92LHN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0ZTM3 Arachis hypogaea
AT2G25790 Arabidopsis thaliana
ATR0705G214 Amborella trichopoda
Atru.chr7.2076 Acer truncatum
AUR62009261 Chenopodium quinoa
AUR62042445 Chenopodium quinoa
BcaB01g03012 Brassica carinata
BcaC01g04901 Brassica carinata
BolC3t15590H Brassica oleracea
BraA03t11920Z Brassica rapa
C03p32510 Brassica napus
CAN.G20.31 Capsicum annuum
CANSAT25G2596 Cannabis sativa
CARHR115450 Cardamine hirsuta
Carub.0004s0558 Capsella rubella
Ca_15583_v3 Cicer arietinum L.
Cc08_g09750 Coffea canephora
Cfa012426 Carpinus fangiana
Ciclev10007358m.g Citrus clementina
CiPaw.07G203300 Carya illinoinensis
CiPaw.08G026500 Carya illinoinensis
ClCG11G015100 Citrullus lanatus
COL.COLO4_20982 Corchorus olitorius
Cpa.g.sc78.19 Carica papaya
CsaV3_3G048500 Cucumis sativus L.
CSS0037445 Camellia sinensis var. sinensis
CSS0046720 Camellia sinensis var. sinensis
DCAR_007719 Daucus carota
Dinv23378 Davidia involucrata
Dinv27911 Davidia involucrata
Dinv27912 Davidia involucrata
Duzib168G2391 Durio zibethinus
Duzib187G1170 Durio zibethinus
ECA248G1998 Erigeron canadensis
EL10Ac2g03999 Beta vulgaris
Eucgr.C02938 Eucalyptus grandis
FAN15G1541 Fragaria x ananassa
FAN20G1185 Fragaria x ananassa
FAN27G1690 Fragaria x ananassa
FvH4_2g35370 Fragaria vesca
Glyma.04G085200 Glycine max
Glyma.06G086800 Glycine max
Gohir.A05G046000 Gossypium hirsutum
Gohir.A07G022261 Gossypium hirsutum
Gohir.D05G047700 Gossypium hirsutum
Gohir.D07G025600 Gossypium hirsutum
Gorai.001G026700 Gossypium raimondii
Gorai.009G049000 Gossypium raimondii
GSVIVG01035611001 Vitis vinifera
HanXRQChr04g0108781 Helianthus annuus
HanXRQChr11g0352421 Helianthus annuus
Haze_21901 Corylus avellana
Hma1.2p1_0049F.1_g028470 Hydrangea macrophylla
Hund03389 Selenicereus undatus
Lalb_Chr11g0064531 Lupinus albus
Lalb_Chr11g0064541 Lupinus albus
Lj1g0013409 Lotus japonicus
Lj7A699T52 Lonicera japonica
Lj8C571G7 Lonicera japonica
Lsat_1_v5_gn_1_45940 Lactuca sativa
Manes.03G059300 Manihot esculenta
Manes.16G074500 Manihot esculenta
MBI04_g06587_MAGBIO Magnolia biondii
MD08G1112700 Malus domestica
MD15G1092100 Malus domestica
Medtr3g109820 Medicago truncatula
MELO3C003469.2 Cucumis melo
Migut.A00195 Erythranthe guttata
MSTRG.11694 Avicennia marina
Nitab4.5_0006339g0010 Nicotiana tabacum
Nitab4.5_0006460g0010 Nicotiana tabacum
Nn6g35300 Nelumbo nucifera
Nn8g39108 Nelumbo nucifera
Oeu015250.1 Olea europaea
Oeu023209.1 Olea europaea
Peaxi162Scf00654g00310 Petunia axillaris
PGR044G2164 Punica granatum
PGSC0003DMG400029146 Solanum tuberosum
Phvul.009G110600 Phaseolus vulgaris
Potri.006G237400 Populus trichocarpa
Potri.018G045500 Populus trichocarpa
Prupe.1G447000 Prunus persica
Psat0s3655g0040 Pisum sativum
PSO210G3622 Papaver somniferum
PSO210G5503 Papaver somniferum
QL12p041230 Quercus lobata
RcHm_v2.0_Chr6g0306541 Rosa chinensis
Rhsim02G0176500 Rhododendron simsii
RhsimUnG0061800 Rhododendron simsii
Sabra06G0185600 Salix brachista
Sabra18G0044600 Salix brachista
SalBow4G3093 Salvia bowleyana
Sc06g0000810 Simmondsia chinensis
Sed0025526 Sechium edule
SEGI_07415 Sequoiadendron giganteum
SGA_v2.0_scaffold243G44282 Striga asiatica
Solyc08g066490.3 Solanum lycopersicum
Sopen08g020310 Solanum pennellii
Sp4g05550 Schrenkiella parvula
TAR383G0643 Trochodendron aralioides
TAR626G1974 Trochodendron aralioides
THA.LOC104803754 Tarenaya hassleriana
Thecc.09G046300 Theobroma cacao
Thhalv10001899m.g Eutrema salsugineum
TPR.G15101 Trifolium pratense
TWI34G1754 Tripterygium wilfordii
TWI63G0396 Tripterygium wilfordii
vmacro11053 Vaccinium macrocarpon
VMungo1309G1662 Vigna mungo

User provided reference genes

Program Settings