Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia40309 Actinidia chinensis
Ah.04g155120 Amaranthus hybridus
Aqoxy22s005 Aquilegia oxysepala
Aqoxy2G02860 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8F5MWG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A55GHP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IR9GWY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RE2MDR Arachis hypogaea
ATR0693G301 Amborella trichopoda
Atru.chr4.2933 Acer truncatum
Atru.chr4.2934 Acer truncatum
AUR62016159 Chenopodium quinoa
AUR62035073 Chenopodium quinoa
CAN.G14.14 Capsicum annuum
CANSAT78G1743 Cannabis sativa
Ca_21468_v3 Cicer arietinum L.
Ca_21502_v3 Cicer arietinum L.
Cc03_g01320 Coffea canephora
CDE05G0963 Ceratophyllum demersum
CDE11G0221 Ceratophyllum demersum
Cfa015452 Carpinus fangiana
Ciclev10005318m.g Citrus clementina
CiPaw.01G144100 Carya illinoinensis
CiPaw.02G078700 Carya illinoinensis
ClCG05G006320 Citrullus lanatus
COL.COLO4_34693 Corchorus olitorius
Cpa.g.sc9.112 Carica papaya
CsaV3_3G014950 Cucumis sativus L.
CSS0018997 Camellia sinensis var. sinensis
DCAR_023309 Daucus carota
Dinv29707 Davidia involucrata
Dinv44337 Davidia involucrata
Duzib052G0831 Durio zibethinus
Duzib151G1176 Durio zibethinus
Duzib212G0998 Durio zibethinus
ECA240G3740 Erigeron canadensis
ECA246G0139 Erigeron canadensis
EL10Ac3g04934 Beta vulgaris
Eucgr.H03971 Eucalyptus grandis
FAN07G1462 Fragaria x ananassa
FAN12G3246 Fragaria x ananassa
FAN12G4353 Fragaria x ananassa
FvH4_4g18950 Fragaria vesca
Glyma.07G244000 Glycine max
Glyma.15G146700 Glycine max
Glyma.17G029900 Glycine max
Gohir.A02G051500 Gossypium hirsutum
Gohir.A10G167700 Gossypium hirsutum
Gohir.D02G056400 Gossypium hirsutum
Gohir.D10G173750 Gossypium hirsutum
Gorai.005G062300 Gossypium raimondii
Gorai.011G194300 Gossypium raimondii
GSVIVG01035078001 Vitis vinifera
HanXRQChr03g0084941 Helianthus annuus
Haze_01136 Corylus avellana
Hma1.2p1_0013F.1_g009095 Hydrangea macrophylla
Hma1.2p1_1352F.1_g277580 Hydrangea macrophylla
Hund03092 Selenicereus undatus
Lalb_Chr07g0182231 Lupinus albus
Lalb_Chr18g0059061 Lupinus albus
Lj4g0003398 Lotus japonicus
Lj4g0016264 Lotus japonicus
Lj6C683T11 Lonicera japonica
Lsat_1_v5_gn_3_21921 Lactuca sativa
Manes.03G200250 Manihot esculenta
Manes.15G008800 Manihot esculenta
MBI18_g04566_MAGBIO Magnolia biondii
MBI19_g05148_MAGBIO Magnolia biondii
MD13G1161800 Malus domestica
MD16G1161600 Malus domestica
Medtr4g120750 Medicago truncatula
MELO3C006691.2 Cucumis melo
Migut.N00064 Erythranthe guttata
MSTRG.21783 Avicennia marina
MSTRG.3881 Avicennia marina
Nitab4.5_0000306g0330 Nicotiana tabacum
Nitab4.5_0002755g0070 Nicotiana tabacum
Nn3g21581 Nelumbo nucifera
Nn4g25705 Nelumbo nucifera
Oeu016262.1 Olea europaea
Oeu028327.1 Olea europaea
Oeu033816.1 Olea europaea
Os01g0309800 Oryza sativa ssp. japonica
Peaxi162Scf00065g01019 Petunia axillaris
PGR004G1654 Punica granatum
PGR031G0547 Punica granatum
PGSC0003DMG400006243 Solanum tuberosum
Phvul.003G108900 Phaseolus vulgaris
Potri.010G005300 Populus trichocarpa
Prupe.1G129100 Prunus persica
Psat4g024920 Pisum sativum
PSO170G0180 Papaver somniferum
PSO170G5603 Papaver somniferum
PSO357G0434 Papaver somniferum
PSO407G0319 Papaver somniferum
QL06p010948 Quercus lobata
RcHm_v2.0_Chr4g0423841 Rosa chinensis
Rhsim04G0228400 Rhododendron simsii
Sabra10G0004500 Salix brachista
SalBow2G1430 Salvia bowleyana
Sed0012680 Sechium edule
SEGI_23232 Sequoiadendron giganteum
SGA_v2.0_scaffold146G36231 Striga asiatica
Solyc01g065690.3 Solanum lycopersicum
Sopen01g027090 Solanum pennellii
TAR362G0125 Trochodendron aralioides
TAR365G1113 Trochodendron aralioides
TAR371G1102 Trochodendron aralioides
TAR636G3297 Trochodendron aralioides
THA.LOC104805828 Tarenaya hassleriana
THA.LOC104823747 Tarenaya hassleriana
Thecc.04G291400 Theobroma cacao
TPR.G4842 Trifolium pratense
TWI09G0148 Tripterygium wilfordii
TWI53G1979 Tripterygium wilfordii
unitig_748.g8718 Utricularia gibba
vmacro08097 Vaccinium macrocarpon
Zm00001eb130400 Zea mays

User provided reference genes

Program Settings