Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p44600 Brassica napus
Aa31LG5G10500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.926 Anthoceros agrestis
Actinidia13461 Actinidia chinensis
Actinidia36063 Actinidia chinensis
Ah.16g106960 Amaranthus hybridus
AL3G10820 Arabidopsis lyrata
Aqoxy3G00899 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D3X87A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T59QJ9 Arachis hypogaea
AT3G01380 Arabidopsis thaliana
ATR0800G105 Amborella trichopoda
Atru.chr8.2421 Acer truncatum
AUR62032098 Chenopodium quinoa
AUR62037862 Chenopodium quinoa
BcaC05g30466 Brassica carinata
BcaNung07363 Brassica carinata
BolC5t35145H Brassica oleracea
BraA05t23196Z Brassica rapa
C07p01310 Brassica napus
C09p75190 Brassica napus
CAN.G206.54 Capsicum annuum
CARHR075590 Cardamine hirsuta
CARHR075600 Cardamine hirsuta
Carub.0003s0071 Capsella rubella
Ca_19612_v3 Cicer arietinum L.
Cc07_g02570 Coffea canephora
CDE04G3020 Ceratophyllum demersum
Cfa007465 Carpinus fangiana
Cfa024795 Carpinus fangiana
Ciclev10010988m.g Citrus clementina
CiPaw.03G035000 Carya illinoinensis
COL.COLO4_06141 Corchorus olitorius
Cpa.g.sc14.89 Carica papaya
CSS0036605 Camellia sinensis var. sinensis
DCAR_013961 Daucus carota
Dinv35027 Davidia involucrata
Duzib264G0565 Durio zibethinus
ECA232G1242 Erigeron canadensis
Eucgr.I01836 Eucalyptus grandis
FAN02G4477 Fragaria x ananassa
FAN05G2940 Fragaria x ananassa
FAN09G2300 Fragaria x ananassa
FAN14G3523 Fragaria x ananassa
FvH4_6g50180 Fragaria vesca
Glyma.01G077400 Glycine max
Gohir.A07G218100 Gossypium hirsutum
Gohir.D07G225200 Gossypium hirsutum
Gorai.001G259600 Gossypium raimondii
GSVIVG01032529001 Vitis vinifera
HanXRQChr09g0265861 Helianthus annuus
Haze_14630 Corylus avellana
Hma1.2p1_0697F.1_g204985 Hydrangea macrophylla
Hma1.2p1_1975F.1_g309760 Hydrangea macrophylla
HPP92_017062 Vanilla planifolia
Hund19981 Selenicereus undatus
Lalb_Chr21g0316351 Lupinus albus
Lj1g0011358 Lotus japonicus
Lju41A31T33 Lonicera japonica
Lsat_1_v5_gn_4_181101 Lactuca sativa
Manes.17G118300 Manihot esculenta
Mapoly0007s0201 Marchantia polymorpha
MBI14_g02685_MAGBIO Magnolia biondii
MCO14G282 Micromonas commoda
MD09G1038400 Malus domestica
MD17G1039500 Malus domestica
Medtr7g030060 Medicago truncatula
Medtr7g038700 Medicago truncatula
Migut.H00153 Erythranthe guttata
Nitab4.5_0001952g0170 Nicotiana tabacum
Nitab4.5_0005206g0050 Nicotiana tabacum
Nn4g22901 Nelumbo nucifera
Os02g0581000 Oryza sativa ssp. japonica
Peaxi162Scf00129g00823 Petunia axillaris
Peaxi162Scf00129g00824 Petunia axillaris
PGR142G1957 Punica granatum
PGSC0003DMG400000509 Solanum tuberosum
Phvul.008G153100 Phaseolus vulgaris
Potri.001G350700 Populus trichocarpa
Pp3c17_22750 Physcomitrium patens
Prupe.2G019300 Prunus persica
Prupe.3G279400 Prunus persica
Psat3g165760 Pisum sativum
PSO161G0132 Papaver somniferum
PSO478G0736 Papaver somniferum
QL02p077913 Quercus lobata
RcHm_v2.0_Chr2g0170441 Rosa chinensis
RcHm_v2.0_Chr7g0219531 Rosa chinensis
RcHm_v2.0_Chr7g0219551 Rosa chinensis
RcHm_v2.0_Chr7g0219561 Rosa chinensis
RcHm_v2.0_Chr7g0219571 Rosa chinensis
RcHm_v2.0_Chr7g0219581 Rosa chinensis
Rhsim10G0027600 Rhododendron simsii
Sabra16G0230200 Salix brachista
SalBow1G5751 Salvia bowleyana
Sc06g0002580 Simmondsia chinensis
SEGI_22900 Sequoiadendron giganteum
SEGI_27782 Sequoiadendron giganteum
SEGI_37358 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34838 Striga asiatica
SMO244G0055 Selaginella moellendorffii
Solyc02g087170.4 Solanum lycopersicum
Sopen02g031910 Solanum pennellii
Sp3g00690 Schrenkiella parvula
TAR374G1603 Trochodendron aralioides
THA.LOC104821073 Tarenaya hassleriana
Thecc.04G003900 Theobroma cacao
Thhalv10020372m.g Eutrema salsugineum
Thhalv10021056m.g Eutrema salsugineum
Thhalv10022528m.g Eutrema salsugineum
TPR.G17640 Trifolium pratense
TPR.G39126 Trifolium pratense
TWI36G1051 Tripterygium wilfordii
unitig_21.g20502 Utricularia gibba
unitig_21.g20503 Utricularia gibba
vmacro05794 Vaccinium macrocarpon
VMungo1383G0108 Vigna mungo
Zm00001eb245310 Zea mays

User provided reference genes

Program Settings