Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p44250 Brassica napus
Aa31LG4G1880 Aethionema arabicum
Actinidia07356 Actinidia chinensis
Actinidia12787 Actinidia chinensis
Ah.04g151690 Amaranthus hybridus
AL2G39590 Arabidopsis lyrata
Aqoxy6G02086 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.07WNF7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3MK98 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QG7W63 Arachis hypogaea
AT1G79120 Arabidopsis thaliana
ATR0763G098 Amborella trichopoda
Atru.chr13.2041 Acer truncatum
AUR62008771 Chenopodium quinoa
AUR62025467 Chenopodium quinoa
BcaB02g08667 Brassica carinata
BcaC08g47475 Brassica carinata
BcaNung04900 Brassica carinata
BcaNung04901 Brassica carinata
BcaNung04903 Brassica carinata
BcaNung04904 Brassica carinata
BcaNung04905 Brassica carinata
BcaNung04906 Brassica carinata
BolC6t40317H Brassica oleracea
BraA07t31933Z Brassica rapa
C06p52990 Brassica napus
CAN.G710.38 Capsicum annuum
CANSAT80G0996 Cannabis sativa
CARHR072780 Cardamine hirsuta
Carub.0002s2599 Capsella rubella
Ca_12990_v3 Cicer arietinum L.
Cc05_g16130 Coffea canephora
CDE06G1888 Ceratophyllum demersum
Cfa003101 Carpinus fangiana
Ciclev10020719m.g Citrus clementina
CiPaw.01G106000 Carya illinoinensis
CiPaw.01G106100 Carya illinoinensis
COL.COLO4_07376 Corchorus olitorius
Cpa.g.sc5.79 Carica papaya
CsaV3_1G014890 Cucumis sativus L.
CSS0032673 Camellia sinensis var. sinensis
CSS0039860 Camellia sinensis var. sinensis
CSS0046879 Camellia sinensis var. sinensis
CSS0048850 Camellia sinensis var. sinensis
DCAR_013735 Daucus carota
Duzib268G0490 Durio zibethinus
Eucgr.A00499 Eucalyptus grandis
FAN04G0239 Fragaria x ananassa
FAN08G3394 Fragaria x ananassa
FAN13G2657 Fragaria x ananassa
FAN18G1363 Fragaria x ananassa
FvH4_5g24801 Fragaria vesca
Glyma.07G037800 Glycine max
Gohir.A04G048300 Gossypium hirsutum
Gohir.A05G267000 Gossypium hirsutum
Gohir.D05G268600 Gossypium hirsutum
Gohir.D05G331700 Gossypium hirsutum
Gorai.009G281200 Gossypium raimondii
Gorai.009G355600 Gossypium raimondii
GSVIVG01036927001 Vitis vinifera
HanXRQChr10g0286641 Helianthus annuus
Haze_25899 Corylus avellana
Hma1.2p1_0496F.1_g165980 Hydrangea macrophylla
HPP92_012281 Vanilla planifolia
HPP92_012291 Vanilla planifolia
Lalb_Chr03g0031781 Lupinus albus
Lj3g0008054 Lotus japonicus
Lj8P188T30 Lonicera japonica
Lsat_1_v5_gn_2_106780 Lactuca sativa
Lsat_1_v5_gn_9_36361 Lactuca sativa
Manes.12G158600 Manihot esculenta
MBI18_g11474_MAGBIO Magnolia biondii
MD05G1220600 Malus domestica
MD10G1203000 Malus domestica
MELO3C004699.2 Cucumis melo
Migut.H01692 Erythranthe guttata
MSTRG.13065 Avicennia marina
Nn6g34812 Nelumbo nucifera
Oeu017989.1 Olea europaea
Oeu017990.2 Olea europaea
Os03g0667400 Oryza sativa ssp. japonica
Os03g0668400 Oryza sativa ssp. japonica
PGR102G0749 Punica granatum
PGSC0003DMG400014067 Solanum tuberosum
Phvul.011G174500 Phaseolus vulgaris
Potri.001G439100 Populus trichocarpa
Prupe.4G139300 Prunus persica
Psat4g138080 Pisum sativum
PSO541G4726 Papaver somniferum
PSO675G1115 Papaver somniferum
QL04p076583 Quercus lobata
RcHm_v2.0_Chr7g0215141 Rosa chinensis
Rhsim06G0239300 Rhododendron simsii
Sabra16G0297000 Salix brachista
SalBow4G0170 Salvia bowleyana
Sc06g0001930 Simmondsia chinensis
Sed0013017 Sechium edule
SEGI_09512 Sequoiadendron giganteum
SGA_v2.0_scaffold239G44047 Striga asiatica
SHI21449 Sapria himalayana
SMO364G0579 Selaginella moellendorffii
Sopen09g036150 Solanum pennellii
Sp5g34170 Schrenkiella parvula
TAR371G1007 Trochodendron aralioides
THA.LOC104808121 Tarenaya hassleriana
Thecc.07G150800 Theobroma cacao
Thecc.07G151700 Theobroma cacao
Thhalv10019555m.g Eutrema salsugineum
TPR.G28748 Trifolium pratense
TWI39G0656 Tripterygium wilfordii
unitig_21.g20253 Utricularia gibba
vmacro11669 Vaccinium macrocarpon
VMungo0647G1219 Vigna mungo
VMungo1127G0553 Vigna mungo
VMungo1127G1619 Vigna mungo
Zm00001eb052230 Zea mays
Zm00001eb217570 Zea mays
Zm00001eb243720 Zea mays
Zm00001eb420460 Zea mays

User provided reference genes

Program Settings