Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG11G630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2078 Anthoceros agrestis
Actinidia19109 Actinidia chinensis
AL3G51110 Arabidopsis lyrata
Aqoxy3G02847 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2PZF9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9W8DT5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5Y7BI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UB4QBN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1G4VU Arachis hypogaea
AT5G63040 Arabidopsis thaliana
ATR1152G060 Amborella trichopoda
Atru.chr9.2517 Acer truncatum
AUR62008185 Chenopodium quinoa
AUR62028765 Chenopodium quinoa
BcaB04g19952 Brassica carinata
BcaC04g23369 Brassica carinata
BolC9t53817H Brassica oleracea
BraA09t36450Z Brassica rapa
CAN.G22.19 Capsicum annuum
CANSAT80G0622 Cannabis sativa
CARHR276840 Cardamine hirsuta
Carub.0008s2375 Capsella rubella
Ca_16157_v3 Cicer arietinum L.
Cc04_g12330 Coffea canephora
CDE06G1157 Ceratophyllum demersum
Cfa019166 Carpinus fangiana
Ciclev10020708m.g Citrus clementina
CiPaw.12G028300 Carya illinoinensis
ClCG06G017110 Citrullus lanatus
COL.COLO4_30098 Corchorus olitorius
Cpa.g.sc153.4 Carica papaya
CsaV3_1G001390 Cucumis sativus L.
CsaV3_1G029060 Cucumis sativus L.
CSS0018322 Camellia sinensis var. sinensis
CSS0033777 Camellia sinensis var. sinensis
DCAR_016474 Daucus carota
Dinv38563 Davidia involucrata
Duzib068G0599 Durio zibethinus
ECA247G2325 Erigeron canadensis
EL10Ac5g10715 Beta vulgaris
Eucgr.K02823 Eucalyptus grandis
FAN04G1241 Fragaria x ananassa
FAN04G2540 Fragaria x ananassa
FAN08G3219 Fragaria x ananassa
FAN13G2858 Fragaria x ananassa
FAN18G1595 Fragaria x ananassa
FAN18G3341 Fragaria x ananassa
FvH4_5g05620 Fragaria vesca
Glyma.04G185500 Glycine max
Glyma.05G039200 Glycine max
Glyma.05G039300 Glycine max
Glyma.06G180600 Glycine max
Gohir.A09G172700 Gossypium hirsutum
Gohir.D09G168400 Gossypium hirsutum
Gorai.006G190000 Gossypium raimondii
GSVIVG01007705001 Vitis vinifera
HanXRQChr02g0035971 Helianthus annuus
Haze_07541 Corylus avellana
Hund09452 Selenicereus undatus
Lalb_Chr11g0070411 Lupinus albus
Lalb_Chr23g0273311 Lupinus albus
Lj1g0004806 Lotus japonicus
Lj5A126T85 Lonicera japonica
Lsat_1_v5_gn_1_28241 Lactuca sativa
Manes.06G107000 Manihot esculenta
Mapoly0071s0121 Marchantia polymorpha
Mapoly0229s0007 Marchantia polymorpha
MBI10_g36534_MAGBIO Magnolia biondii
MD06G1171000 Malus domestica
MD14G1176700 Malus domestica
Medtr3g077500 Medicago truncatula
MELO3C026285.2 Cucumis melo
Migut.D01960 Erythranthe guttata
Migut.O00122 Erythranthe guttata
MSTRG.4363 Avicennia marina
Nitab4.5_0000025g0470 Nicotiana tabacum
Nitab4.5_0014195g0010 Nicotiana tabacum
Nn4g22691 Nelumbo nucifera
Oeu023439.1 Olea europaea
Oeu024702.3 Olea europaea
Os01g0704200 Oryza sativa ssp. japonica
PGR044G0204 Punica granatum
PGSC0003DMG400005293 Solanum tuberosum
Phvul.009G176300 Phaseolus vulgaris
Potri.012G088700 Populus trichocarpa
Pp3c21_4590 Physcomitrium patens
Prupe.5G170600 Prunus persica
Psat5g115560 Pisum sativum
PSO063G3972 Papaver somniferum
PSO832G3209 Papaver somniferum
QL10p010881 Quercus lobata
RcHm_v2.0_Chr7g0193191 Rosa chinensis
Rhsim12G0166200 Rhododendron simsii
Sabra12G0063900 Salix brachista
SalBow5G5496 Salvia bowleyana
Sc10g0010140 Simmondsia chinensis
Sed0027860 Sechium edule
SEGI_11013 Sequoiadendron giganteum
SEGI_20742 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10821 Striga asiatica
SGA_v2.0_scaffold25G10826 Striga asiatica
SHI17121 Sapria himalayana
SMO358G0340 Selaginella moellendorffii
Sopen12g014410 Solanum pennellii
Sopen12g014450 Solanum pennellii
Sp2g26170 Schrenkiella parvula
TAR371G0662 Trochodendron aralioides
TAR629G1829 Trochodendron aralioides
THA.LOC104821479 Tarenaya hassleriana
Thecc.03G018600 Theobroma cacao
Thhalv10004444m.g Eutrema salsugineum
TPR.G14918 Trifolium pratense
TWI14G0324 Tripterygium wilfordii
TWI23G0250 Tripterygium wilfordii
unitig_21.g20445 Utricularia gibba
vmacro16626 Vaccinium macrocarpon
VMungo1215G1540 Vigna mungo
Zm00001eb155560 Zea mays

User provided reference genes

Program Settings