Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p13970 Brassica napus
Aa31LG2G1020 Aethionema arabicum
Actinidia28725 Actinidia chinensis
Ah.02g123330 Amaranthus hybridus
AL2G11270 Arabidopsis lyrata
Aqoxy278s001 Aquilegia oxysepala
Aqoxy6G02103 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea
AT1G63855 Arabidopsis thaliana
ATR0661G256 Amborella trichopoda
Atru.chr3.884 Acer truncatum
Atru.chr3.895 Acer truncatum
AUR62003702 Chenopodium quinoa
AUR62018011 Chenopodium quinoa
BcaB07g31542 Brassica carinata
BcaC04g22675 Brassica carinata
BcaC04g22678 Brassica carinata
BolC4t24505H Brassica oleracea
BolC9t54579H Brassica oleracea
BraA09t37044Z Brassica rapa
C04p29720 Brassica napus
CAN.G576.2 Capsicum annuum
CANSAT01G0215 Cannabis sativa
CARHR047280 Cardamine hirsuta
CARHR047310 Cardamine hirsuta
Carub.0002s0099 Capsella rubella
Ca_24936_v3 Cicer arietinum L.
Cc07_g11200 Coffea canephora
CDE05G1799 Ceratophyllum demersum
Cfa007050 Carpinus fangiana
Cfa007051 Carpinus fangiana
Ciclev10026368m.g Citrus clementina
CiPaw.07G062000 Carya illinoinensis
ClCG01G020530 Citrullus lanatus
COL.COLO4_22483 Corchorus olitorius
Cpa.g.sc29.52 Carica papaya
CsaV3_6G047410 Cucumis sativus L.
CSS0012608 Camellia sinensis var. sinensis
CSS0026839 Camellia sinensis var. sinensis
CSS0046970 Camellia sinensis var. sinensis
DCAR_023133 Daucus carota
Duzib147G0156 Durio zibethinus
ECA246G0119 Erigeron canadensis
EL10Ac6g15168 Beta vulgaris
Eucgr.I02315 Eucalyptus grandis
FAN19G0356 Fragaria x ananassa
FAN23G2677 Fragaria x ananassa
FAN26G1827 Fragaria x ananassa
FAN28G2493 Fragaria x ananassa
FvH4_1g11230 Fragaria vesca
Glyma.01G163200 Glycine max
Glyma.02G164500 Glycine max
Glyma.11G080201 Glycine max
Gohir.A11G041100 Gossypium hirsutum
Gohir.D11G044400 Gossypium hirsutum
Gorai.007G047700 Gossypium raimondii
GSVIVG01007224001 Vitis vinifera
HanXRQChr16g0531741 Helianthus annuus
Haze_03682 Corylus avellana
HPP92_012950 Vanilla planifolia
Hund14069 Selenicereus undatus
Lalb_Chr09g0321491 Lupinus albus
Lj2A482T63 Lonicera japonica
Lj2g0007566 Lotus japonicus
Lsat_1_v5_gn_3_71521 Lactuca sativa
Manes.01G150100 Manihot esculenta
Mapoly0041s0084 Marchantia polymorpha
MD15G1238900 Malus domestica
Medtr2g078490 Medicago truncatula
Medtr3g096562 Medicago truncatula
Medtr3g096570 Medicago truncatula
Medtr5g022860 Medicago truncatula
MELO3C007934.2 Cucumis melo
Migut.N00678 Erythranthe guttata
MSTRG.17961 Avicennia marina
Nitab4.5_0000188g0160 Nicotiana tabacum
Nitab4.5_0002337g0130 Nicotiana tabacum
Nn6g31942 Nelumbo nucifera
Oeu058205.1 Olea europaea
Oeu058207.1 Olea europaea
Os02g0120300 Oryza sativa ssp. japonica
Peaxi162Scf00439g00049 Petunia axillaris
PGR119G0426 Punica granatum
PGSC0003DMG401023885 Solanum tuberosum
Phvul.002G105300 Phaseolus vulgaris
Potri.005G109000 Populus trichocarpa
Pp3c3_3170 Physcomitrium patens
Pp3c3_3178 Physcomitrium patens
Prupe.7G173600 Prunus persica
Psat2g152400 Pisum sativum
PSO541G1183 Papaver somniferum
PSO675G1483 Papaver somniferum
QL06p051396 Quercus lobata
RcHm_v2.0_Chr2g0098641 Rosa chinensis
Rhsim01G0268300 Rhododendron simsii
Rhsim08G0031100 Rhododendron simsii
Sabra05G0089300 Salix brachista
SalBow3G1250 Salvia bowleyana
SalBow3G2083 Salvia bowleyana
Sc22g0002270 Simmondsia chinensis
Sed0008453 Sechium edule
Sed0011409 Sechium edule
SEGI_40099 Sequoiadendron giganteum
SGA_v2.0_scaffold77G25309 Striga asiatica
SMO340G0117 Selaginella moellendorffii
Solyc02g061950.4 Solanum lycopersicum
Sopen02g012910 Solanum pennellii
Sp2g00830 Schrenkiella parvula
THA.LOC104817830 Tarenaya hassleriana
Thecc.01G012900 Theobroma cacao
Thhalv10023706m.g Eutrema salsugineum
TPR.G25110 Trifolium pratense
TWI73G1304 Tripterygium wilfordii
unitig_60.g25574 Utricularia gibba
vmacro18434 Vaccinium macrocarpon
VMungo1215G1582 Vigna mungo
Zm00001eb229980 Zea mays

User provided reference genes

Program Settings