Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27190 Brassica napus
A04p00030 Brassica napus
Aa31LG10G17430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis
Actinidia24670 Actinidia chinensis
Actinidia36713 Actinidia chinensis
AL5G46400 Arabidopsis lyrata
Aqoxy3G03705 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea
AT3G63540 Arabidopsis thaliana
ATR0605G006 Amborella trichopoda
Atru.chr11.2648 Acer truncatum
AUR62009377 Chenopodium quinoa
AUR62023058 Chenopodium quinoa
BcaB01g02988 Brassica carinata
BcaC01g04883 Brassica carinata
BolC3t15604H Brassica oleracea
BraA03t11932Z Brassica rapa
C03p32680 Brassica napus
CAN.G170.111 Capsicum annuum
CANSAT80G2127 Cannabis sativa
CARHR291430 Cardamine hirsuta
Carub.0005s3015 Capsella rubella
Ca_14368_v3 Cicer arietinum L.
CBR_g23941 Chara braunii
Cc02_g27800 Coffea canephora
CDE05G1882 Ceratophyllum demersum
CDE05G3657 Ceratophyllum demersum
Ciclev10032624m.g Citrus clementina
CiPaw.13G004400 Carya illinoinensis
ClCG09G004240 Citrullus lanatus
COL.COLO4_23924 Corchorus olitorius
Cpa.g.sc386.5 Carica papaya
Cre03.g198850 Chlamydomonas reinhardtii
Cre03.g198863 Chlamydomonas reinhardtii
CsaV3_7G031150 Cucumis sativus L.
DCAR_029663 Daucus carota
Dinv43453 Davidia involucrata
Duzib138G1675 Durio zibethinus
ECA248G3622 Erigeron canadensis
EL10Ac2g03652 Beta vulgaris
Eucgr.G03390 Eucalyptus grandis
Eucgr.H02489 Eucalyptus grandis
FAN01G1688 Fragaria x ananassa
FAN06G1876 Fragaria x ananassa
FAN10G1997 Fragaria x ananassa
FvH4_7g00900 Fragaria vesca
Glyma.08G154300 Glycine max
Glyma.15G273300 Glycine max
Gohir.A08G053600 Gossypium hirsutum
Gohir.D08G063100 Gossypium hirsutum
Gorai.004G065300 Gossypium raimondii
HanXRQChr01g0016151 Helianthus annuus
Haze_03213 Corylus avellana
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla
HPP92_007477 Vanilla planifolia
Lalb_Chr01g0015361 Lupinus albus
Lj1g0010524 Lotus japonicus
Lj7A569T67 Lonicera japonica
Lsat_1_v5_gn_1_107841 Lactuca sativa
Manes.10G144600 Manihot esculenta
Mapoly0075s0034 Marchantia polymorpha
MBI01_g27616_MAGBIO Magnolia biondii
MCO12G188 Micromonas commoda
MCO14G442 Micromonas commoda
MD02G1313800 Malus domestica
MD07G1008600 Malus domestica
Medtr3g028150 Medicago truncatula
MELO3C023542.2 Cucumis melo
Migut.B01319 Erythranthe guttata
Nitab4.5_0000634g0080 Nicotiana tabacum
Nitab4.5_0002477g0050 Nicotiana tabacum
Nn113s43373 Nelumbo nucifera
Nn2g15435 Nelumbo nucifera
Oeu036185.1 Olea europaea
Os08g0504500 Oryza sativa ssp. japonica
Peaxi162Scf00347g00071 Petunia axillaris
Peaxi162Scf00428g00063 Petunia axillaris
PGR031G3843 Punica granatum
PGSC0003DMG400006872 Solanum tuberosum
Phvul.005G020200 Phaseolus vulgaris
Potri.009G062500 Populus trichocarpa
Pp3c4_11800 Physcomitrium patens
PRCOL_00004469 Prasinoderma coloniale
Prupe.2G012000 Prunus persica
Psat5g204320 Pisum sativum
PSO135G0340 Papaver somniferum
PSO384G0049 Papaver somniferum
QL04p007215 Quercus lobata
RcHm_v2.0_Chr1g0315791 Rosa chinensis
RcHm_v2.0_Chr3g0473601 Rosa chinensis
Rhsim07G0054800 Rhododendron simsii
Sabra09G0046200 Salix brachista
SalBow5G3403 Salvia bowleyana
Sc10g0000020 Simmondsia chinensis
Sed0006624 Sechium edule
SEGI_20764 Sequoiadendron giganteum
SEGI_25651 Sequoiadendron giganteum
SGA_v2.0_scaffold167G38443 Striga asiatica
SMO217G0004 Selaginella moellendorffii
SMO356G0122 Selaginella moellendorffii
Solyc01g087040.2 Solanum lycopersicum
Sopen01g034120 Solanum pennellii
Sp1g00010 Schrenkiella parvula
Sp5g00040 Schrenkiella parvula
TAR623G0094 Trochodendron aralioides
TAR623G0130 Trochodendron aralioides
THA.LOC104819691 Tarenaya hassleriana
Thecc.01G412000 Theobroma cacao
Thhalv10006361m.g Eutrema salsugineum
TPR.G12217 Trifolium pratense
TWI09G1547 Tripterygium wilfordii
TWI53G1868 Tripterygium wilfordii
unitig_750.g28451 Utricularia gibba
vmacro13656 Vaccinium macrocarpon
VMungo1080G1360 Vigna mungo
Zm00001eb034740 Zea mays

User provided reference genes

Program Settings