Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p26830 Brassica napus
Aa31LG9G10130 Aethionema arabicum
Actinidia09006 Actinidia chinensis
Actinidia32099 Actinidia chinensis
Actinidia39136 Actinidia chinensis
Ah.01g005790 Amaranthus hybridus
AL6G47480 Arabidopsis lyrata
Aqoxy7G03978 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea
AT4G12540 Arabidopsis thaliana
ATR0705G093 Amborella trichopoda
Atru.chr1.3525 Acer truncatum
AUR62031924 Chenopodium quinoa
BcaC01g04588 Brassica carinata
BcaC04g21238 Brassica carinata
BolC3t15911H Brassica oleracea
BolC9t56238H Brassica oleracea
BraA09t38254Z Brassica rapa
C03p36010 Brassica napus
C09p34000 Brassica napus
CANSAT56G2677 Cannabis sativa
CARHR253650 Cardamine hirsuta
Carub.0006s3171 Capsella rubella
Ca_23263_v3 Cicer arietinum L.
Ca_23272_v3 Cicer arietinum L.
Cc04_g02540 Coffea canephora
CDE02G1085 Ceratophyllum demersum
CDE04G0136 Ceratophyllum demersum
CDE04G1568 Ceratophyllum demersum
Cfa003646 Carpinus fangiana
Ciclev10027417m.g Citrus clementina
CiPaw.01G231300 Carya illinoinensis
ClCG00G003340 Citrullus lanatus
ClCG07G013320 Citrullus lanatus
COL.COLO4_30514 Corchorus olitorius
Cpa.g.sc25.10 Carica papaya
Cpa.g.sc25.28 Carica papaya
CsaV3_3G023590 Cucumis sativus L.
CSS0005978 Camellia sinensis var. sinensis
CSS0034583 Camellia sinensis var. sinensis
DCAR_023081 Daucus carota
Dinv11548 Davidia involucrata
Dinv30435 Davidia involucrata
Dinv37976 Davidia involucrata
Duzib192G0766 Durio zibethinus
Duzib235G1269 Durio zibethinus
ECA232G4726 Erigeron canadensis
ECA234G0697 Erigeron canadensis
EL10Ac3g05317 Beta vulgaris
Eucgr.J02937 Eucalyptus grandis
FAN02G4526 Fragaria x ananassa
FAN05G1069 Fragaria x ananassa
FAN14G5382 Fragaria x ananassa
FvH4_6g32410 Fragaria vesca
Glyma.07G015400 Glycine max
Glyma.08G200900 Glycine max
Gohir.A06G189500 Gossypium hirsutum
Gohir.D06G197900 Gossypium hirsutum
Gorai.010G230700 Gossypium raimondii
GSVIVG01016979001 Vitis vinifera
HanXRQChr09g0276261 Helianthus annuus
Haze_15849 Corylus avellana
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla
Hund28829 Selenicereus undatus
Hund28870 Selenicereus undatus
Lalb_Chr01g0013161 Lupinus albus
Lj3g0008384 Lotus japonicus
Lj9A513G60 Lonicera japonica
Lsat_1_v5_gn_4_97420 Lactuca sativa
Manes.11G033400 Manihot esculenta
MBI01_g10133_MAGBIO Magnolia biondii
MD09G1202700 Malus domestica
MD17G1183900 Malus domestica
Medtr8g014490 Medicago truncatula
MELO3C013001.2 Cucumis melo
Migut.I00896 Erythranthe guttata
MSTRG.11026 Avicennia marina
Nitab4.5_0001172g0120 Nicotiana tabacum
Nitab4.5_0004241g0050 Nicotiana tabacum
Nn6g35322 Nelumbo nucifera
Nn8g39070 Nelumbo nucifera
Oeu017120.1 Olea europaea
Os05g0532500 Oryza sativa ssp. japonica
Peaxi162Scf00177g00125 Petunia axillaris
PGR102G3207 Punica granatum
PGSC0003DMG400026441 Solanum tuberosum
Phvul.010G145200 Phaseolus vulgaris
Potri.005G053300 Populus trichocarpa
Potri.013G040800 Populus trichocarpa
Prupe.3G058900 Prunus persica
Psat4g197400 Pisum sativum
PSO210G4778 Papaver somniferum
PSO210G6928 Papaver somniferum
QL05p019947 Quercus lobata
QL05p020021 Quercus lobata
RcHm_v2.0_Chr2g0140551 Rosa chinensis
Rhsim08G0227700 Rhododendron simsii
Sabra05G0046800 Salix brachista
Sabra13G0037700 Salix brachista
Sc12g0010170 Simmondsia chinensis
Sed0020930 Sechium edule
SGA_v2.0_scaffold69G23318 Striga asiatica
Solyc12g044620.2 Solanum lycopersicum
Sopen12g023080 Solanum pennellii
Sp6g04980 Schrenkiella parvula
SpUn0055_0020 Schrenkiella parvula
TAR624G0518 Trochodendron aralioides
TAR636G1866 Trochodendron aralioides
THA.LOC104806335 Tarenaya hassleriana
Thecc.06G100200 Theobroma cacao
Thhalv10028639m.g Eutrema salsugineum
TPR.G26946 Trifolium pratense
TWI75G1374 Tripterygium wilfordii
unitig_748.g7440 Utricularia gibba
unitig_748.g7441 Utricularia gibba
vmacro17014 Vaccinium macrocarpon
VMungo0331G0583 Vigna mungo
Zm00001eb353790 Zea mays

User provided reference genes

Program Settings