Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p38390 Brassica napus
Aa31LG3G3840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1580 Anthoceros agrestis
Actinidia01014 Actinidia chinensis
Actinidia07779 Actinidia chinensis
Ah.10g029630 Amaranthus hybridus
AL3G22370 Arabidopsis lyrata
Aqoxy4G03308 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.10EZJ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2X8VUU Arachis hypogaea
AT3G10850 Arabidopsis thaliana
ATR1127G175 Amborella trichopoda
Atru.chr12.212 Acer truncatum
AUR62031661 Chenopodium quinoa
AUR62032547 Chenopodium quinoa
BcaB06g25651 Brassica carinata
BraA05t22630Z Brassica rapa
C05p57290 Brassica napus
CAN.G17.20 Capsicum annuum
CANSAT56G3309 Cannabis sativa
CARHR085420 Cardamine hirsuta
Carub.0003s1009 Capsella rubella
Ca_05524_v3 Cicer arietinum L.
Ca_29313_v3 Cicer arietinum L.
Ca_29718_v3 Cicer arietinum L.
Cc02_g05090 Coffea canephora
Cc02_g05100 Coffea canephora
CDE04G0806 Ceratophyllum demersum
Cfa001187 Carpinus fangiana
Cfa025793 Carpinus fangiana
Ciclev10032268m.g Citrus clementina
CiPaw.01G308000 Carya illinoinensis
ClCG07G005310 Citrullus lanatus
COL.COLO4_19489 Corchorus olitorius
Cpa.g.sc19.34 Carica papaya
CsaV3_5G011130 Cucumis sativus L.
CSS0009745 Camellia sinensis var. sinensis
CSS0033401 Camellia sinensis var. sinensis
DCAR_014658 Daucus carota
Dinv34509 Davidia involucrata
Duzib114G0841 Durio zibethinus
EL10Ac2g02685 Beta vulgaris
FAN01G0302 Fragaria x ananassa
FAN06G1898 Fragaria x ananassa
FAN10G1510 Fragaria x ananassa
FvH4_7g26250 Fragaria vesca
Glyma.02G220100 Glycine max
Glyma.04G224100 Glycine max
Glyma.06G140800 Glycine max
Glyma.14G187700 Glycine max
Gohir.A05G404800 Gossypium hirsutum
Gohir.D04G010900 Gossypium hirsutum
Gorai.012G013100 Gossypium raimondii
GSVIVG01032864001 Vitis vinifera
HanXRQChr14g0460961 Helianthus annuus
Haze_17378 Corylus avellana
Haze_27434 Corylus avellana
Hma1.2p1_3340F.1_g335380 Hydrangea macrophylla
Hma1.2p1_3340F.1_g335390 Hydrangea macrophylla
HPP92_012568 Vanilla planifolia
Hund13403 Selenicereus undatus
Hund13430 Selenicereus undatus
Lalb_Chr11g0067631 Lupinus albus
Lj8A51T70 Lonicera japonica
LjContig00155g0016618 Lotus japonicus
Lsat_1_v5_gn_2_127360 Lactuca sativa
Manes.07G141600 Manihot esculenta
MBI03_g02710_MAGBIO Magnolia biondii
MCO15G269 Micromonas commoda
MD01G1171200 Malus domestica
Medtr5g068440 Medicago truncatula
MELO3C020172.2 Cucumis melo
Migut.F01225 Erythranthe guttata
MSTRG.8388 Avicennia marina
Nitab4.5_0005479g0020 Nicotiana tabacum
Nitab4.5_0023080g0010 Nicotiana tabacum
Nn5g26792 Nelumbo nucifera
Os03g0332400 Oryza sativa ssp. japonica
Peaxi162Scf00304g00832 Petunia axillaris
PGR044G0421 Punica granatum
PGSC0003DMG400027594 Solanum tuberosum
Phvul.008G187100 Phaseolus vulgaris
Phvul.009G042000 Phaseolus vulgaris
Potri.019G062600 Populus trichocarpa
Pp3c8_15440 Physcomitrium patens
PRCOL_00004659 Prasinoderma coloniale
Prupe.2G266700 Prunus persica
Psat2g062440 Pisum sativum
PSO017G5589 Papaver somniferum
QL08p065179 Quercus lobata
RcHm_v2.0_Chr1g0372701 Rosa chinensis
RcHm_v2.0_Chr6g0266531 Rosa chinensis
Rhsim09G0186800 Rhododendron simsii
Sabra19G0071500 Salix brachista
Sabra19G0075900 Salix brachista
Sabra19G0080900 Salix brachista
SalBow2G0541 Salvia bowleyana
Sc11g0006080 Simmondsia chinensis
Sed0013571 Sechium edule
SEGI_02077 Sequoiadendron giganteum
SEGI_08969 Sequoiadendron giganteum
SGA_v2.0_scaffold160G37761 Striga asiatica
SMO144G0148 Selaginella moellendorffii
Solyc06g048530.4 Solanum lycopersicum
Sopen06g014700 Solanum pennellii
Sp3g09170 Schrenkiella parvula
TAR633G1645 Trochodendron aralioides
TAR636G2862 Trochodendron aralioides
TAR636G3606 Trochodendron aralioides
THA.LOC104826876 Tarenaya hassleriana
Thecc.10G186600 Theobroma cacao
Thhalv10021361m.g Eutrema salsugineum
TPR.G33926 Trifolium pratense
TWI09G0016 Tripterygium wilfordii
unitig_90.g27550 Utricularia gibba
vmacro09949 Vaccinium macrocarpon
VMungo0647G2425 Vigna mungo
VMungo1309G1205 Vigna mungo
Zm00001eb015860 Zea mays

User provided reference genes

Program Settings