Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p18240 Brassica napus
Aa31LG7G13040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.506 Anthoceros agrestis
Actinidia33311 Actinidia chinensis
Ah.09g228610 Amaranthus hybridus
Ah.09g228620 Amaranthus hybridus
AL4G13910 Arabidopsis lyrata
Aqoxy7G02504 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.399FKM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.98G6T7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K47WMW Arachis hypogaea
AT2G23890 Arabidopsis thaliana
ATR0580G109 Amborella trichopoda
Atru.chr7.426 Acer truncatum
AUR62028394 Chenopodium quinoa
AUR62039765 Chenopodium quinoa
BcaB06g27943 Brassica carinata
BcaC02g08526 Brassica carinata
BolC4t26895H Brassica oleracea
BraA04t17437Z Brassica rapa
C04p53410 Brassica napus
CAN.G1190.25 Capsicum annuum
CANSAT11G1011 Cannabis sativa
CARHR184860 Cardamine hirsuta
Carub.0004s0304 Capsella rubella
Ca_21162_v3 Cicer arietinum L.
Cc06_g14400 Coffea canephora
CDE04G2271 Ceratophyllum demersum
Cfa012898 Carpinus fangiana
Ciclev10007905m.g Citrus clementina
CiPaw.07G237500 Carya illinoinensis
ClCG06G012760 Citrullus lanatus
COL.COLO4_36423 Corchorus olitorius
Cpa.g.sc75.95 Carica papaya
CsaV3_1G029300 Cucumis sativus L.
CSS0005227 Camellia sinensis var. sinensis
CSS0021809 Camellia sinensis var. sinensis
DCAR_017934 Daucus carota
Dinv41318 Davidia involucrata
Dinv41319 Davidia involucrata
Duzib168G2165 Durio zibethinus
ECA236G0084 Erigeron canadensis
EL10Ac8g18883 Beta vulgaris
Eucgr.C00229 Eucalyptus grandis
FAN07G1293 Fragaria x ananassa
FAN22G1187 Fragaria x ananassa
FvH4_4g08620 Fragaria vesca
Glyma.17G069800 Glycine max
Gohir.A01G157300 Gossypium hirsutum
Gohir.A05G007200 Gossypium hirsutum
Gohir.A05G007233 Gossypium hirsutum
Gohir.D05G008100 Gossypium hirsutum
Gorai.009G008200 Gossypium raimondii
GSVIVG01023720001 Vitis vinifera
HanXRQChr05g0140041 Helianthus annuus
Haze_21260 Corylus avellana
HPP92_017164 Vanilla planifolia
Hund08965 Selenicereus undatus
Lalb_Chr13g0300611 Lupinus albus
Lj4g0026155 Lotus japonicus
Lj9A726G34 Lonicera japonica
Lsat_1_v5_gn_8_64200 Lactuca sativa
Manes.09G001200 Manihot esculenta
Mapoly0062s0075 Marchantia polymorpha
MBI02_g07700_MAGBIO Magnolia biondii
MBI02_g43679_MAGBIO Magnolia biondii
MBI14_g28323_MAGBIO Magnolia biondii
MBI14_g41535_MAGBIO Magnolia biondii
MBI16_g43872_MAGBIO Magnolia biondii
MD16G1260500 Malus domestica
Medtr4g129920 Medicago truncatula
MELO3C010187.2 Cucumis melo
MELO3C032437.2 Cucumis melo
MELO3C033270.2 Cucumis melo
MELO3C033905.2 Cucumis melo
MELO3C035066.2 Cucumis melo
Migut.K00287 Erythranthe guttata
MSTRG.26248 Avicennia marina
Nitab4.5_0001427g0020 Nicotiana tabacum
Nitab4.5_0003269g0030 Nicotiana tabacum
Nn2g12519 Nelumbo nucifera
Os09g0424600 Oryza sativa ssp. japonica
Peaxi162Scf00038g00120 Petunia axillaris
PGR142G1911 Punica granatum
PGSC0003DMG401011220 Solanum tuberosum
Phvul.003G152500 Phaseolus vulgaris
Potri.018G100600 Populus trichocarpa
Pp3c23_12500 Physcomitrium patens
Prupe.1G099400 Prunus persica
Psat0s3878g0120 Pisum sativum
PSO017G3324 Papaver somniferum
PSO017G4403 Papaver somniferum
PSO170G6875 Papaver somniferum
QL02p094660 Quercus lobata
RcHm_v2.0_Chr4g0405151 Rosa chinensis
Rhsim03G0261500 Rhododendron simsii
Sabra18G0086800 Salix brachista
SalBow1G6770 Salvia bowleyana
Sc18g0003230 Simmondsia chinensis
Sc18g0003240 Simmondsia chinensis
Sed0024845 Sechium edule
SEGI_05240 Sequoiadendron giganteum
SEGI_36000 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06035 Striga asiatica
SMO364G0821 Selaginella moellendorffii
Solyc07g006190.3 Solanum lycopersicum
Sopen07g002300 Solanum pennellii
Sp4g02790 Schrenkiella parvula
TAR625G1342 Trochodendron aralioides
THA.LOC104803527 Tarenaya hassleriana
Thecc.09G158000 Theobroma cacao
Thhalv10000110m.g Eutrema salsugineum
TPR.G24834 Trifolium pratense
TWI32G0120 Tripterygium wilfordii
TWI63G0758 Tripterygium wilfordii
unitig_746.g26566 Utricularia gibba
unitig_899.g15469 Utricularia gibba
vmacro06043 Vaccinium macrocarpon
VMungo1215G3347 Vigna mungo
Zm00001eb313430 Zea mays

User provided reference genes

Program Settings