Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia04569 Actinidia chinensis
Actinidia08740 Actinidia chinensis
Actinidia34302 Actinidia chinensis
Ah.13g072640 Amaranthus hybridus
Aqoxy7G00876 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4MFR3H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JUAY6G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LQ97JF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VS67CL Arachis hypogaea
ATR0829G059 Amborella trichopoda
Atru.chr12.1986 Acer truncatum
AUR62005907 Chenopodium quinoa
AUR62028158 Chenopodium quinoa
AUR62028160 Chenopodium quinoa
CAN.G303.74 Capsicum annuum
CANSAT21G0533 Cannabis sativa
CANSAT21G1267 Cannabis sativa
Ca_24450_v3 Cicer arietinum L.
Ca_29247_v3 Cicer arietinum L.
Cc02_g00370 Coffea canephora
CDE02G2862 Ceratophyllum demersum
CDE02G4784 Ceratophyllum demersum
CDE11G0509 Ceratophyllum demersum
Cfa015879 Carpinus fangiana
Ciclev10018854m.g Citrus clementina
CiPaw.05G238500 Carya illinoinensis
ClCG10G009060 Citrullus lanatus
COL.COLO4_06399 Corchorus olitorius
Cpa.g.sc659.1 Carica papaya
Cpa.g.sc659.3 Carica papaya
Cpa.g.sc659.4 Carica papaya
Cpa.g.sc877.1 Carica papaya
Cpa.g.sc877.2 Carica papaya
Cre14.g621351 Chlamydomonas reinhardtii
CsaV3_4G008710 Cucumis sativus L.
CSS0014281 Camellia sinensis var. sinensis
CSS0049591 Camellia sinensis var. sinensis
DCAR_010546 Daucus carota
Dinv29167 Davidia involucrata
Duzib106G0833 Durio zibethinus
Duzib177G0258 Durio zibethinus
Duzib177G0481 Durio zibethinus
Duzib260G0004 Durio zibethinus
ECA238G0596 Erigeron canadensis
EL10Ac3g05091 Beta vulgaris
Eucgr.K00092 Eucalyptus grandis
FAN01G2135 Fragaria x ananassa
FAN03G0335 Fragaria x ananassa
FAN10G1381 Fragaria x ananassa
FAN17G2009 Fragaria x ananassa
FAN25G2448 Fragaria x ananassa
FvH4_3g43851 Fragaria vesca
FvH4_3g43881 Fragaria vesca
FvH4_7g33820 Fragaria vesca
Glyma.01G229200 Glycine max
Glyma.11G012000 Glycine max
Gohir.A13G155300 Gossypium hirsutum
Gohir.D13G160100 Gossypium hirsutum
Gorai.013G181000 Gossypium raimondii
GSVIVG01024422001 Vitis vinifera
HanXRQChr14g0462961 Helianthus annuus
Haze_00609 Corylus avellana
Haze_00610 Corylus avellana
Hma1.2p1_1235F.1_g269080 Hydrangea macrophylla
Hund21094 Selenicereus undatus
Lalb_Chr16g0376611 Lupinus albus
Lj3C889T5 Lonicera japonica
LjContig00222g0021656 Lotus japonicus
Lsat_1_v5_gn_2_135361 Lactuca sativa
Lsat_1_v5_gn_4_27441 Lactuca sativa
Manes.09G124400 Manihot esculenta
Mapoly0035s0150 Marchantia polymorpha
MBI04_g36034_MAGBIO Magnolia biondii
MBI04_g37552_MAGBIO Magnolia biondii
MCO15G413 Micromonas commoda
MD07G1306500 Malus domestica
Medtr5g007870 Medicago truncatula
MELO3C024870.2 Cucumis melo
Migut.F00951 Erythranthe guttata
MSTRG.8578 Avicennia marina
Nitab4.5_0000021g0450 Nicotiana tabacum
Nitab4.5_0005081g0010 Nicotiana tabacum
Nn1g01970 Nelumbo nucifera
Oeu061067.1 Olea europaea
Os02g0699400 Oryza sativa ssp. japonica
Peaxi162Scf00745g00860 Petunia axillaris
PGR142G1409 Punica granatum
PGSC0003DMG400000537 Solanum tuberosum
Phvul.002G038200 Phaseolus vulgaris
Potri.013G089000 Populus trichocarpa
Pp3c16_11940 Physcomitrium patens
PRCOL_00001354 Prasinoderma coloniale
Prupe.2G324500 Prunus persica
Psat0s769g0040 Pisum sativum
PSO675G9306 Papaver somniferum
QL09p024751 Quercus lobata
QL09p024763 Quercus lobata
QL09p024777 Quercus lobata
RcHm_v2.0_Chr1g0383931 Rosa chinensis
Rhsim03G0220900 Rhododendron simsii
Sabra13G0069500 Salix brachista
Sabra13G0069600 Salix brachista
SalBow2G2269 Salvia bowleyana
Sc25g0001170 Simmondsia chinensis
Sed0005129 Sechium edule
SEGI_10998 Sequoiadendron giganteum
SEGI_15200 Sequoiadendron giganteum
SGA_v2.0_scaffold59G20777 Striga asiatica
SMO169G0151 Selaginella moellendorffii
Solyc03g096900.4 Solanum lycopersicum
Sopen03g027650 Solanum pennellii
TAR374G0425 Trochodendron aralioides
Thecc.05G209300 Theobroma cacao
TPR.G37925 Trifolium pratense
TWI34G0259 Tripterygium wilfordii
unitig_52.g16851 Utricularia gibba
unitig_52.g16852 Utricularia gibba
vmacro06504 Vaccinium macrocarpon
VMungo1215G2356 Vigna mungo
Zm00001eb188060 Zea mays

User provided reference genes

Program Settings