Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p43810 Brassica napus
Aa31LG4G2400 Aethionema arabicum
Aa31LG4G2410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.489 Anthoceros agrestis
Actinidia03621 Actinidia chinensis
Ah.04g163940 Amaranthus hybridus
AL2G38960 Arabidopsis lyrata
Aqoxy1G01881 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A1RUKD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AVJ0IE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BUF90N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WT9QCD Arachis hypogaea
AT1G78560 Arabidopsis thaliana
ATR0763G119 Amborella trichopoda
AUR62013941 Chenopodium quinoa
AUR62019668 Chenopodium quinoa
BcaC08g47434 Brassica carinata
BolC6t40265H Brassica oleracea
BraA07t31890Z Brassica rapa
C06p52460 Brassica napus
CANSAT56G1032 Cannabis sativa
CARHR072050 Cardamine hirsuta
Carub.0002s2541 Capsella rubella
Ca_03924_v3 Cicer arietinum L.
Cc05_g10620 Coffea canephora
CDE05G1302 Ceratophyllum demersum
CDE05G2171 Ceratophyllum demersum
Ciclev10020318m.g Citrus clementina
CiPaw.12G110000 Carya illinoinensis
ClCG11G017120 Citrullus lanatus
COL.COLO4_03605 Corchorus olitorius
Cpa.g.sc682.5 Carica papaya
Cre17.g725650 Chlamydomonas reinhardtii
CsaV3_4G032780 Cucumis sativus L.
DCAR_017587 Daucus carota
EL10Ac4g08437 Beta vulgaris
Eucgr.F03227 Eucalyptus grandis
FAN11G0107 Fragaria x ananassa
FAN16G1964 Fragaria x ananassa
FAN21G2606 Fragaria x ananassa
FAN25G0219 Fragaria x ananassa
FvH4_3g17590 Fragaria vesca
Glyma.12G234600 Glycine max
Glyma.13G264300 Glycine max
Gohir.A01G046900 Gossypium hirsutum
Gohir.D01G037600 Gossypium hirsutum
Gorai.002G045800 Gossypium raimondii
GSVIVG01014084001 Vitis vinifera
GSVIVG01014085001 Vitis vinifera
HanXRQChr10g0305601 Helianthus annuus
Haze_08446 Corylus avellana
HPP92_018428 Vanilla planifolia
Hund10402 Selenicereus undatus
Lalb_Chr01g0016271 Lupinus albus
Lj1A822T51 Lonicera japonica
Lj3g0014038 Lotus japonicus
Lsat_1_v5_gn_5_126301 Lactuca sativa
Manes.03G078100 Manihot esculenta
Mapoly0050s0070 Marchantia polymorpha
MBI02_g32395_MAGBIO Magnolia biondii
MBI02_g32396_MAGBIO Magnolia biondii
MCO14G078 Micromonas commoda
MD03G1250900 Malus domestica
MD03G1251000 Malus domestica
MD03G1251100 Malus domestica
MD03G1251200 Malus domestica
MD11G1271200 Malus domestica
MD11G1271700 Malus domestica
MD11G1271800 Malus domestica
Medtr2g073070 Medicago truncatula
Medtr2g073080 Medicago truncatula
Medtr2g073190 Medicago truncatula
MELO3C025675.2 Cucumis melo
Migut.M00688 Erythranthe guttata
MSTRG.14988 Avicennia marina
Nitab4.5_0000092g0190 Nicotiana tabacum
Nitab4.5_0000092g0330 Nicotiana tabacum
Nitab4.5_0001386g0010 Nicotiana tabacum
Nn3g20955 Nelumbo nucifera
Oeu010037.1 Olea europaea
Oeu010038.1 Olea europaea
Os04g0381100 Oryza sativa ssp. japonica
Peaxi162Scf00000g76016 Petunia axillaris
PGR031G3430 Punica granatum
PGSC0003DMG400019027 Solanum tuberosum
Phvul.005G076100 Phaseolus vulgaris
Phvul.005G078101 Phaseolus vulgaris
Potri.011G103200 Populus trichocarpa
Pp3c18_12460 Physcomitrium patens
PRCOL_00004648 Prasinoderma coloniale
Prupe.4G155400 Prunus persica
Psat1g007560 Pisum sativum
Psat1g007600 Pisum sativum
PSO541G4101 Papaver somniferum
PSO675G4586 Papaver somniferum
PSO675G8358 Papaver somniferum
RcHm_v2.0_Chr5g0029301 Rosa chinensis
RhsimUnG0206100 Rhododendron simsii
Sabra11G0077500 Salix brachista
Sabra11G0082400 Salix brachista
SalBow8G5603 Salvia bowleyana
Sc16g0007780 Simmondsia chinensis
Sed0007276 Sechium edule
SEGI_05556 Sequoiadendron giganteum
SEGI_39487 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24378 Striga asiatica
SMO367G0186 Selaginella moellendorffii
Solyc12g005410.2 Solanum lycopersicum
Sopen12g001380 Solanum pennellii
Sp5g33650 Schrenkiella parvula
TAR629G1459 Trochodendron aralioides
THA.LOC104812302 Tarenaya hassleriana
Thecc.07G135000 Theobroma cacao
Thhalv10018656m.g Eutrema salsugineum
TPR.G35008 Trifolium pratense
TWI38G0474 Tripterygium wilfordii
unitig_62.g23077 Utricularia gibba
vmacro09420 Vaccinium macrocarpon
VMungo1080G0497 Vigna mungo
VMungo1080G0956 Vigna mungo
Zm00001eb043270 Zea mays

User provided reference genes

Program Settings