Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11020 Brassica napus
Aa31LG6G1700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis
Actinidia01330 Actinidia chinensis
Actinidia29284 Actinidia chinensis
Ah.12g055570 Amaranthus hybridus
AL7G35150 Arabidopsis lyrata
Aqoxy5G00552 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea
AT4G19003 Arabidopsis thaliana
ATR0796G253 Amborella trichopoda
Atru.chr3.2397 Acer truncatum
AUR62007364 Chenopodium quinoa
BcaB06g29627 Brassica carinata
BcaB07g30589 Brassica carinata
BcaC09g51446 Brassica carinata
BcaNung04023 Brassica carinata
BcaNung06620 Brassica carinata
BraA01t01049Z Brassica rapa
CAN.G773.29 Capsicum annuum
CANSAT21G2314 Cannabis sativa
CARHR225840 Cardamine hirsuta
CARHR288450 Cardamine hirsuta
Carub.0007s2216 Capsella rubella
CBR_g10842 Chara braunii
Cc08_g03740 Coffea canephora
CDE02G0997 Ceratophyllum demersum
Cfa009033 Carpinus fangiana
Cfa024503 Carpinus fangiana
Ciclev10002637m.g Citrus clementina
CiPaw.12G069400 Carya illinoinensis
ClCG06G010630 Citrullus lanatus
COL.COLO4_16920 Corchorus olitorius
Cre02.g076400 Chlamydomonas reinhardtii
CsaV3_3G001280 Cucumis sativus L.
CSS0012354 Camellia sinensis var. sinensis
CSS0042811 Camellia sinensis var. sinensis
DCAR_024956 Daucus carota
Dinv06918 Davidia involucrata
Dinv29017 Davidia involucrata
Duzib068G1343 Durio zibethinus
Duzib205G0370 Durio zibethinus
ECA233G1922 Erigeron canadensis
EL10Ac5g11997 Beta vulgaris
Eucgr.E01313 Eucalyptus grandis
Eucgr.E01319 Eucalyptus grandis
FAN13G1728 Fragaria x ananassa
FAN18G0120 Fragaria x ananassa
FAN18G2874 Fragaria x ananassa
FvH4_5g23270 Fragaria vesca
Glyma.01G011400 Glycine max
Glyma.09G209600 Glycine max
Gohir.A03G000027 Gossypium hirsutum
Gohir.D03G176700 Gossypium hirsutum
Gohir.D12G043050 Gossypium hirsutum
Gorai.003G186000 Gossypium raimondii
GSVIVG01009131001 Vitis vinifera
GSVIVG01013027001 Vitis vinifera
HanXRQChr12g0362191 Helianthus annuus
HanXRQChr14g0430781 Helianthus annuus
Haze_08131 Corylus avellana
Haze_12062 Corylus avellana
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla
HPP92_023365 Vanilla planifolia
Hund14383 Selenicereus undatus
Lalb_Chr16g0380971 Lupinus albus
Lj2g0021996 Lotus japonicus
Lj8A133G65 Lonicera japonica
Lsat_1_v5_gn_9_15400 Lactuca sativa
Manes.01G194600 Manihot esculenta
Mapoly0004s0185 Marchantia polymorpha
MCO12G007 Micromonas commoda
MD11G1243800 Malus domestica
Medtr5g028000 Medicago truncatula
MELO3C013816.2 Cucumis melo
Migut.E01322 Erythranthe guttata
MSTRG.1795 Avicennia marina
Nitab4.5_0002188g0010 Nicotiana tabacum
Nitab4.5_0002897g0050 Nicotiana tabacum
Nn1g09734 Nelumbo nucifera
Oeu017091.1 Olea europaea
Os01g0658500 Oryza sativa ssp. japonica
Peaxi162Scf00052g00336 Petunia axillaris
PGR042G1238 Punica granatum
PGSC0003DMG400003501 Solanum tuberosum
PGSC0003DMG400009297 Solanum tuberosum
Phvul.002G134150 Phaseolus vulgaris
Phvul.002G134300 Phaseolus vulgaris
Potri.001G135700 Populus trichocarpa
Pp3c15_1420 Physcomitrium patens
PRCOL_00001914 Prasinoderma coloniale
Prupe.4G182100 Prunus persica
Psat2g139880 Pisum sativum
PSO017G0801 Papaver somniferum
PSO170G4469 Papaver somniferum
QL12p001835 Quercus lobata
RcHm_v2.0_Chr7g0212211 Rosa chinensis
Rhsim06G0208000 Rhododendron simsii
Sabra01G0105000 Salix brachista
SalBow8G0964 Salvia bowleyana
Sc10g0009260 Simmondsia chinensis
Sed0011153 Sechium edule
SEGI_13659 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04249 Striga asiatica
SGA_v2.0_scaffold8G04421 Striga asiatica
SMO364G0912 Selaginella moellendorffii
Solyc08g076130.3 Solanum lycopersicum
Sopen08g024770 Solanum pennellii
Sp7g17730 Schrenkiella parvula
THA.LOC104798450 Tarenaya hassleriana
THA.LOC104806177 Tarenaya hassleriana
Thecc.03G311400 Theobroma cacao
Thhalv10015765m.g Eutrema salsugineum
Thhalv10026368m.g Eutrema salsugineum
TPR.G19460 Trifolium pratense
TWI60G1033 Tripterygium wilfordii
unitig_61.g26418 Utricularia gibba
vmacro00263 Vaccinium macrocarpon
VMungo1215G1847 Vigna mungo
Zm00001eb157890 Zea mays

User provided reference genes

Program Settings