Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p20470 Brassica napus
Aa31LG5G3680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis
Actinidia39894 Actinidia chinensis
Ah.04g156060 Amaranthus hybridus
AL8G16870 Arabidopsis lyrata
Aqoxy5G00253 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea
AT5G43430 Arabidopsis thaliana
ATR0680G075 Amborella trichopoda
Atru.chr4.2091 Acer truncatum
AUR62002111 Chenopodium quinoa
AUR62028231 Chenopodium quinoa
BcaB07g31008 Brassica carinata
BcaC04g21915 Brassica carinata
BolC9t55493H Brassica oleracea
BraA09t37652Z Brassica rapa
C09p25850 Brassica napus
CAN.G793.35 Capsicum annuum
CANSAT78G2507 Cannabis sativa
CARHR180150 Cardamine hirsuta
Carub.0008s0516 Capsella rubella
Ca_09820_v3 Cicer arietinum L.
Cc03_g05380 Coffea canephora
CDE05G1545 Ceratophyllum demersum
Cfa008326 Carpinus fangiana
Cfa021602 Carpinus fangiana
Ciclev10005707m.g Citrus clementina
CiPaw.02G113800 Carya illinoinensis
ClCG05G004380 Citrullus lanatus
Cpa.g.sc44.77 Carica papaya
Cre12.g554953 Chlamydomonas reinhardtii
CsaV3_3G012200 Cucumis sativus L.
CSS0034990 Camellia sinensis var. sinensis
DCAR_027307 Daucus carota
Dinv27040 Davidia involucrata
Dinv29877 Davidia involucrata
Duzib212G0218 Durio zibethinus
ECA233G3697 Erigeron canadensis
EL10Ac3g05029 Beta vulgaris
Eucgr.H00173 Eucalyptus grandis
FAN12G4283 Fragaria x ananassa
FAN17G1464 Fragaria x ananassa
FAN22G0441 Fragaria x ananassa
FvH4_4g03430 Fragaria vesca
Glyma.10G187300 Glycine max
Glyma.20G203200 Glycine max
Gohir.A09G058300 Gossypium hirsutum
Gohir.D09G057800 Gossypium hirsutum
Gorai.006G072000 Gossypium raimondii
GSVIVG01027767001 Vitis vinifera
HanXRQChr03g0066771 Helianthus annuus
HanXRQChr05g0134481 Helianthus annuus
Haze_11345 Corylus avellana
Haze_26122 Corylus avellana
Haze_27028 Corylus avellana
Haze_27526 Corylus avellana
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla
HPP92_025980 Vanilla planifolia
Hund03034 Selenicereus undatus
Lalb_Chr02g0150531 Lupinus albus
Lj5g0021789 Lotus japonicus
Lj6A662T59 Lonicera japonica
Lsat_1_v5_gn_5_72441 Lactuca sativa
Manes.03G165500 Manihot esculenta
Mapoly0061s0138 Marchantia polymorpha
MBI18_g15334_MAGBIO Magnolia biondii
MD13G1212500 Malus domestica
MD16G1216100 Malus domestica
Medtr1g074170 Medicago truncatula
MELO3C006434.2 Cucumis melo
Migut.N00260 Erythranthe guttata
MSTRG.9902 Avicennia marina
Nitab4.5_0000342g0030 Nicotiana tabacum
Nitab4.5_0003897g0020 Nicotiana tabacum
Nn1g02723 Nelumbo nucifera
Nn3g19624 Nelumbo nucifera
Oeu011992.1 Olea europaea
Os04g0182800 Oryza sativa ssp. japonica
Peaxi162Scf00024g02411 Petunia axillaris
PGR031G3937 Punica granatum
PGSC0003DMG400017180 Solanum tuberosum
Phvul.007G128300 Phaseolus vulgaris
Potri.008G165800 Populus trichocarpa
Pp3c16_12620 Physcomitrium patens
PRCOL_00002410 Prasinoderma coloniale
Prupe.1G037500 Prunus persica
Psat6g128760 Pisum sativum
PSO210G6447 Papaver somniferum
PSO832G2062 Papaver somniferum
QL06p016992 Quercus lobata
RcHm_v2.0_Chr4g0392411 Rosa chinensis
RcHm_v2.0_Chr5g0058341 Rosa chinensis
Rhsim02G0036100 Rhododendron simsii
Sabra08G0126300 Salix brachista
SalBow3G1824 Salvia bowleyana
Sc19g0003600 Simmondsia chinensis
Sed0004292 Sechium edule
SEGI_23974 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22771 Striga asiatica
SHI00666 Sapria himalayana
SMO145G0254 Selaginella moellendorffii
Solyc09g089880.3 Solanum lycopersicum
Sopen09g032820 Solanum pennellii
Sp2g08310 Schrenkiella parvula
TAR636G2559 Trochodendron aralioides
THA.LOC104801088 Tarenaya hassleriana
THA.LOC104826077 Tarenaya hassleriana
Thecc.04G253200 Theobroma cacao
Thhalv10003253m.g Eutrema salsugineum
TPR.G26440 Trifolium pratense
TWI73G0230 Tripterygium wilfordii
unitig_748.g7323 Utricularia gibba
vmacro15431 Vaccinium macrocarpon
VMungo0720G2370 Vigna mungo
VMungo0720G2635 Vigna mungo
Zm00001eb087650 Zea mays
Zm00001eb419600 Zea mays

User provided reference genes

Program Settings