Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05040 Brassica napus
Aa31sc281G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.451 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3330 Anthoceros agrestis
Actinidia03745 Actinidia chinensis
Ah.01g002760 Amaranthus hybridus
Ah.01g015030 Amaranthus hybridus
Ah.04g158080 Amaranthus hybridus
AL1G18290 Arabidopsis lyrata
Aqoxy2G01812 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BKN2Z7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MGF3V6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W744GL Arachis hypogaea
AT1G07960 Arabidopsis thaliana
ATR1159G039 Amborella trichopoda
Atru.chr3.3688 Acer truncatum
AUR62006524 Chenopodium quinoa
BcaB02g06700 Brassica carinata
BcaC05g24710 Brassica carinata
BcaC05g24713 Brassica carinata
BolC5t29359H Brassica oleracea
BraA06t23710Z Brassica rapa
C05p05980 Brassica napus
CAN.G309.11 Capsicum annuum
CANSAT54G1028 Cannabis sativa
CARHR007740 Cardamine hirsuta
Carub.0001s0731 Capsella rubella
CBR_g16054 Chara braunii
CBR_g16056 Chara braunii
CBR_g32082 Chara braunii
CBR_g3892 Chara braunii
Cc01_g11490 Coffea canephora
CDE02G2612 Ceratophyllum demersum
CDE09G0756 Ceratophyllum demersum
Cfa011360 Carpinus fangiana
Ciclev10029486m.g Citrus clementina
CiPaw.14G078100 Carya illinoinensis
ClCG02G020980 Citrullus lanatus
COL.COLO4_24546 Corchorus olitorius
Cpa.g.sc139.73 Carica papaya
Cre16.g656551 Chlamydomonas reinhardtii
Cre16.g692751 Chlamydomonas reinhardtii
CSS0011684 Camellia sinensis var. sinensis
CSS0026412 Camellia sinensis var. sinensis
CSS0034839 Camellia sinensis var. sinensis
DCAR_006049 Daucus carota
Dinv31164 Davidia involucrata
Dinv32784 Davidia involucrata
Duzib168G0016 Durio zibethinus
EL10Ac9g22473 Beta vulgaris
Eucgr.J00949 Eucalyptus grandis
FAN11G3109 Fragaria x ananassa
FAN16G2809 Fragaria x ananassa
FAN25G2160 Fragaria x ananassa
FvH4_3g33160 Fragaria vesca
Glyma.13G328300 Glycine max
Glyma.15G045500 Glycine max
Gohir.A07G116500 Gossypium hirsutum
Gohir.D07G120900 Gossypium hirsutum
Gorai.001G130300 Gossypium raimondii
GSVIVG01025140001 Vitis vinifera
HanXRQChr07g0197431 Helianthus annuus
Haze_23906 Corylus avellana
Hma1.2p1_0071F.1_g038060 Hydrangea macrophylla
Hma1.2p1_0071F.1_g038070 Hydrangea macrophylla
HPP92_003246 Vanilla planifolia
Hund08379 Selenicereus undatus
Lalb_Chr14g0374781 Lupinus albus
Lalb_Chr24g0394461 Lupinus albus
Lj3g0013477 Lotus japonicus
Lsat_1_v5_gn_2_97820 Lactuca sativa
Manes.11G141700 Manihot esculenta
Mapoly0090s0032 Marchantia polymorpha
MBI05_g31455_MAGBIO Magnolia biondii
MCO09G791 Micromonas commoda
MCO16G478 Micromonas commoda
MD03G1105000 Malus domestica
MD11G1130500 Malus domestica
Medtr2g093680 Medicago truncatula
MELO3C025752.2 Cucumis melo
Migut.D02186 Erythranthe guttata
MSTRG.21142 Avicennia marina
Nitab4.5_0001802g0040 Nicotiana tabacum
Nitab4.5_0002129g0050 Nicotiana tabacum
Nn2g10686 Nelumbo nucifera
Oeu059103.2 Olea europaea
Os03g0287900 Oryza sativa ssp. japonica
Peaxi162Scf00389g00918 Petunia axillaris
PGSC0003DMG400019678 Solanum tuberosum
Phvul.005G137100 Phaseolus vulgaris
Potri.009G004500 Populus trichocarpa
Pp3c22_10527 Physcomitrium patens
Pp3c6_3120 Physcomitrium patens
PRCOL_00005748 Prasinoderma coloniale
Prupe.6G095100 Prunus persica
Psat5g277520 Pisum sativum
PSO339G1106 Papaver somniferum
PSO384G0060 Papaver somniferum
QL01p037299 Quercus lobata
RcHm_v2.0_Chr5g0060481 Rosa chinensis
Rhsim01G0219200 Rhododendron simsii
Sabra09G0002000 Salix brachista
SalBow3G4480 Salvia bowleyana
Sc06g0010500 Simmondsia chinensis
Sed0028029 Sechium edule
SEGI_21083 Sequoiadendron giganteum
SGA_v2.0_scaffold61G21169 Striga asiatica
SHI06054 Sapria himalayana
SMO145G0025 Selaginella moellendorffii
Solyc11g069690.3 Solanum lycopersicum
Sopen11g028590 Solanum pennellii
TAR633G2203 Trochodendron aralioides
THA.LOC104826359 Tarenaya hassleriana
Thecc.09G259900 Theobroma cacao
Thhalv10009030m.g Eutrema salsugineum
TWI31G0539 Tripterygium wilfordii
TWI79G1024 Tripterygium wilfordii
unitig_46.g18230 Utricularia gibba
vmacro14456 Vaccinium macrocarpon
VMungo1080G0278 Vigna mungo
Zm00001eb013190 Zea mays

User provided reference genes

Program Settings