Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p28730 Brassica napus
Aa31LG11G1500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2159 Anthoceros agrestis
Actinidia01333 Actinidia chinensis
Actinidia29280 Actinidia chinensis
Ah.04g162870 Amaranthus hybridus
AL8G38790 Arabidopsis lyrata
Aqoxy4G02654 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5N158K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8H8UTP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7BMME Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F1VCW7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8Z8HQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9W603 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QX3XL1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VBI12C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WK2353 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0DKS7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z7R28B Arachis hypogaea
AT5G62030 Arabidopsis thaliana
ATR0564G315 Amborella trichopoda
Atru.chr6.948 Acer truncatum
Atru.chr6.949 Acer truncatum
AUR62004741 Chenopodium quinoa
AUR62037510 Chenopodium quinoa
BcaB02g09615 Brassica carinata
BolC3t18761H Brassica oleracea
BraA06t25814Z Brassica rapa
C03p65030 Brassica napus
CAN.G474.25 Capsicum annuum
CARHR275820 Cardamine hirsuta
Carub.0008s2271 Capsella rubella
Ca_24452_v3 Cicer arietinum L.
CBR_g39210 Chara braunii
Cc08_g03820 Coffea canephora
CDE05G2804 Ceratophyllum demersum
Cfa005566 Carpinus fangiana
Ciclev10001185m.g Citrus clementina
CiPaw.05G040800 Carya illinoinensis
ClCG09G013540 Citrullus lanatus
COL.COLO4_17915 Corchorus olitorius
Cre09.g408500 Chlamydomonas reinhardtii
CsaV3_7G006110 Cucumis sativus L.
CSS0010106 Camellia sinensis var. sinensis
CSS0049051 Camellia sinensis var. sinensis
DCAR_004588 Daucus carota
Dinv06913 Davidia involucrata
Duzib132G0113 Durio zibethinus
ECA240G4319 Erigeron canadensis
EL10Ac4g08897 Beta vulgaris
Eucgr.G00648 Eucalyptus grandis
FAN04G1985 Fragaria x ananassa
FAN08G0633 Fragaria x ananassa
FAN13G0653 Fragaria x ananassa
FAN18G4202 Fragaria x ananassa
FvH4_5g30480 Fragaria vesca
Glyma.09G222400 Glycine max
Glyma.12G035900 Glycine max
Gohir.A03G210100 Gossypium hirsutum
Gohir.D02G231700 Gossypium hirsutum
Gorai.005G259400 Gossypium raimondii
GSVIVG01005261001 Vitis vinifera
HanXRQChr03g0082011 Helianthus annuus
Haze_10785 Corylus avellana
Haze_26324 Corylus avellana
HPP92_012832 Vanilla planifolia
Lalb_Chr05g0211301 Lupinus albus
Lj8A319T61 Lonicera japonica
LjContig00222g0011935 Lotus japonicus
Lsat_1_v5_gn_6_73261 Lactuca sativa
Manes.14G151100 Manihot esculenta
Mapoly0002s0072 Marchantia polymorpha
MBI10_g26061_MAGBIO Magnolia biondii
MD04G1037900 Malus domestica
Medtr5g007970 Medicago truncatula
Medtr6g021680 Medicago truncatula
MELO3C018682.2 Cucumis melo
Migut.A00614 Erythranthe guttata
MSTRG.11901 Avicennia marina
Nitab4.5_0001632g0060 Nicotiana tabacum
Nitab4.5_0002429g0030 Nicotiana tabacum
Nn2g14478 Nelumbo nucifera
Os02g0815600 Oryza sativa ssp. japonica
Peaxi162Scf00185g01125 Petunia axillaris
PGR042G0678 Punica granatum
PGSC0003DMG400016779 Solanum tuberosum
Phvul.002G038000 Phaseolus vulgaris
Potri.019G041300 Populus trichocarpa
Pp3c15_23540 Physcomitrium patens
PRCOL_00005581 Prasinoderma coloniale
Prupe.1G561000 Prunus persica
Psat0s769g0120 Pisum sativum
PSO170G0343 Papaver somniferum
PSO782G4910 Papaver somniferum
QL02p073223 Quercus lobata
RcHm_v2.0_Chr7g0225101 Rosa chinensis
RcHm_v2.0_Chr7g0225141 Rosa chinensis
Rhsim11G0029000 Rhododendron simsii
Sabra19G0051500 Salix brachista
SalBow1G0435 Salvia bowleyana
SalBow1G8647 Salvia bowleyana
Sc20g0000910 Simmondsia chinensis
Sed0023404 Sechium edule
SEGI_34782 Sequoiadendron giganteum
SGA_v2.0_scaffold96G29045 Striga asiatica
SHI26338 Sapria himalayana
SMO165G0082 Selaginella moellendorffii
Solyc06g066300.1 Solanum lycopersicum
Sopen06g021720 Solanum pennellii
Sp2g25200 Schrenkiella parvula
TAR622G0998 Trochodendron aralioides
TAR623G1045 Trochodendron aralioides
THA.LOC104798941 Tarenaya hassleriana
Thecc.02G043600 Theobroma cacao
Thhalv10004160m.g Eutrema salsugineum
TPR.G20775 Trifolium pratense
TWI14G0718 Tripterygium wilfordii
unitig_748.g8133 Utricularia gibba
vmacro00241 Vaccinium macrocarpon
VMungo1215G0185 Vigna mungo
Zm00001eb258780 Zea mays

User provided reference genes

Program Settings