Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17970 Brassica napus
Aa31LG4G18210 Aethionema arabicum
Actinidia36417 Actinidia chinensis
Ah.03g140760 Amaranthus hybridus
AL5G29680 Arabidopsis lyrata
Aqoxy6G02956 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FY2PML Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H9DIKV Arachis hypogaea
AT3G49725 Arabidopsis thaliana
ATR0019G023 Amborella trichopoda
Atru.chr3.1073 Acer truncatum
AUR62004040 Chenopodium quinoa
AUR62007550 Chenopodium quinoa
BcaB01g00678 Brassica carinata
BcaB04g19401 Brassica carinata
BcaB08g36690 Brassica carinata
BcaC07g39436 Brassica carinata
BolC8t50089H Brassica oleracea
BraA06t24888Z Brassica rapa
C08p24750 Brassica napus
CAN.G1343.13 Capsicum annuum
CANSAT01G2205 Cannabis sativa
CANSAT01G2889 Cannabis sativa
CARHR158800 Cardamine hirsuta
Carub.0005s1608 Capsella rubella
Ca_06220_v3 Cicer arietinum L.
Cc07_g07440 Coffea canephora
CDE04G1287 Ceratophyllum demersum
CDE07G0466 Ceratophyllum demersum
Cfa006781 Carpinus fangiana
Ciclev10018139m.g Citrus clementina
Ciclev10025205m.g Citrus clementina
CiPaw.07G037300 Carya illinoinensis
ClCG07G009760 Citrullus lanatus
ClCG07G009800 Citrullus lanatus
ClCG07G009810 Citrullus lanatus
COL.COLO4_11626 Corchorus olitorius
COL.COLO4_11627 Corchorus olitorius
Cpa.g.sc129.63 Carica papaya
Cre07.g353200 Chlamydomonas reinhardtii
CsaV3_4G008510 Cucumis sativus L.
CSS0019775 Camellia sinensis var. sinensis
CSS0036817 Camellia sinensis var. sinensis
CSS0046052 Camellia sinensis var. sinensis
CSS0047485 Camellia sinensis var. sinensis
DCAR_010797 Daucus carota
Dinv23055 Davidia involucrata
Duzib147G0493 Durio zibethinus
ECA246G2498 Erigeron canadensis
EL10Ac6g15582 Beta vulgaris
Eucgr.H02336 Eucalyptus grandis
FAN19G0231 Fragaria x ananassa
FAN23G0818 Fragaria x ananassa
FAN26G0165 Fragaria x ananassa
FvH4_1g18350 Fragaria vesca
Glyma.02G280500 Glycine max
Gohir.A11G211600 Gossypium hirsutum
Gohir.D11G211300 Gossypium hirsutum
Gorai.007G227000 Gossypium raimondii
GSVIVG01002450001 Vitis vinifera
GSVIVG01002709001 Vitis vinifera
HanXRQChr12g0377011 Helianthus annuus
Haze_03978 Corylus avellana
HPP92_008937 Vanilla planifolia
Hund16422 Selenicereus undatus
Lalb_Chr14g0365131 Lupinus albus
Lj4A166T80 Lonicera japonica
LjContig00049g0002658 Lotus japonicus
Lsat_1_v5_gn_3_85860 Lactuca sativa
Manes.12G118300 Manihot esculenta
Mapoly0061s0091 Marchantia polymorpha
MD02G1190600 Malus domestica
MD15G1301700 Malus domestica
Medtr5g089970 Medicago truncatula
MELO3C024853.2 Cucumis melo
Migut.H00320 Erythranthe guttata
MSTRG.23600 Avicennia marina
Nitab4.5_0000142g0480 Nicotiana tabacum
Nitab4.5_0000776g0060 Nicotiana tabacum
Nitab4.5_0001859g0070 Nicotiana tabacum
Nn6g34544 Nelumbo nucifera
Oeu011414.1 Olea europaea
Os03g0727900 Oryza sativa ssp. japonica
Peaxi162Scf00096g01848 Petunia axillaris
PGR102G2456 Punica granatum
PGSC0003DMG400021428 Solanum tuberosum
Phvul.008G200200 Phaseolus vulgaris
Potri.007G007700 Populus trichocarpa
Prupe.6G215400 Prunus persica
Psat2g019280 Pisum sativum
Psat2g019320 Pisum sativum
PSO541G6514 Papaver somniferum
PSO675G4807 Papaver somniferum
QL06p038630 Quercus lobata
QL08p038601 Quercus lobata
RcHm_v2.0_Chr1g0321821 Rosa chinensis
RcHm_v2.0_Chr1g0321831 Rosa chinensis
RcHm_v2.0_Chr2g0109051 Rosa chinensis
RcHm_v2.0_Chr2g0109061 Rosa chinensis
Rhsim10G0094400 Rhododendron simsii
Sabra07G0005900 Salix brachista
Sc16g0002790 Simmondsia chinensis
Sed0000343 Sechium edule
SEGI_39991 Sequoiadendron giganteum
SGA_v2.0_scaffold269G46276 Striga asiatica
SHI11993 Sapria himalayana
SMO117G0055 Selaginella moellendorffii
Solyc02g092010.4 Solanum lycopersicum
Sopen02g036590 Solanum pennellii
Sp5g12360 Schrenkiella parvula
TAR628G0068 Trochodendron aralioides
TAR628G1609 Trochodendron aralioides
THA.LOC104810646 Tarenaya hassleriana
THA.LOC104821215 Tarenaya hassleriana
Thecc.01G077600 Theobroma cacao
Thhalv10010236m.g Eutrema salsugineum
TPR.G19350 Trifolium pratense
TWI53G1431 Tripterygium wilfordii
unitig_899.g14592 Utricularia gibba
vmacro05378 Vaccinium macrocarpon
VMungo0647G1795 Vigna mungo
Zm00001eb055970 Zea mays

User provided reference genes

Program Settings